Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_18860
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Entry
YQ44_18860 CDS
T04539
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03030
DNA replication
jaz03430
Mismatch repair
jaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YQ44_18860
03430 Mismatch repair
YQ44_18860
03440 Homologous recombination
YQ44_18860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jaz03032
]
YQ44_18860
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_18860
Enzymes [BR:
jaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YQ44_18860
DNA replication proteins [BR:
jaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YQ44_18860
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YQ44_18860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_18
AAA_30
DNA_pol3_tau_5
AAA_2
Herpes_Helicase
AAA_19
Mg_chelatase
Glyco_tranf_2_5
TsaE
nSTAND3
AAA_28
Herpes_V23
AAA_assoc_2
AAA_24
Rad17
Motif
Other DBs
NCBI-ProteinID:
APA69499
LinkDB
All DBs
Position
complement(4352055..4354394)
Genome browser
AA seq
779 aa
AA seq
DB search
MSYQVLARKYRPKNFETLVGQEHVVRALTHALHSGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGPDGTGGITAQPCGQCEACTAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILGQEGIAFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGEVTLD
AVQGMLGALDQSYLVRLLDALAQQDGADLLAVADEMASRSLSYNGALQDLGTLLHRIALA
QSVPAALPQDLPEYADIVRLAAAFDAEEVQLFYQIAVHGRNELGLAPDEYAGFTMTLLRM
LAFRPGIGGADGVPAAAPASAPGNRPAAVAAARAAAGASAPAARAATNSVASHAAVTPPA
VVAAAAASLARSEAPPPRAPAAVSAPAPAPAPAAAPPAAAPAAAPAAAASAAPAAPLSSA
RAAINAALEAARAASKGRPGSAPSAPSSAPKPAAPAPAAAVAAPATAPAVPVQAAPPPPA
AAKAPAPWDDAPPVAVMDAPVVAPAPVQQARPAAAPQQAPADDDLPPWVTEFSDDSASAA
VSAPAGAPAMQGNEQPAVIMPQRAAKQAAPSAPYVITPVPGLDWDGNWPAVAAVLPLRGV
AQQLAVQAELIECLHDGHSTTFRLRVPIDTWRSPANVEKLAAALTERFGRKVNVDTELGA
VWYTASAEAQAHREACQLQAEATIASDPFVLDMKRAFDAFVVPGTITPAPAGSAAPTLH
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgtaaataccgccccaagaatttcgagacgctcgtcggc
caggagcacgtcgtgcgcgcgctcacgcatgccttgcacagtggccgattgcatcacgcc
tacctgttcacgggcacgcgcggcgtcggcaagacgaccctgtcgcgcatcctggccaaa
tcgctcaattgcatcggccctgacggcacgggcggcatcacggcccagccgtgcggccag
tgcgaagcgtgcacggcgatcgacgcgggacgctttgtcgactatatcgagatggatgcg
gcgtcgaaccgcggcgtcgatgaaatggcgcagctgctcgagcaagccgtatatgcgcca
agcaatgcgcgcttcaaggtctatatgatcgatgaggtgcacatgctgacgaaccacgcg
ttcaattccatgctgaagacgctggaagagccgcccgagcatgtcaaattcatcctggcc
acgacggacccgcaaaaaatacccgtcaccgtgctgtcgcgctgcctgcagttcaacctc
aagcagatgccgcccggccacatcatcagccacctggacaatatcctggggcaggagggc
atcgccttcgaacagccggccttgcgcctgctggcccagggcgcccacggttccatgcgc
gatgcgctgtcgctgacggaccaggccatcgcgtatgcggccggcgaagtgaccctcgat
gccgtgcaaggcatgctgggggcgctcgaccagtcctacctggtgcgtctgctcgacgcg
ctggcgcagcaggatggcgccgatctcctggccgtggccgacgagatggcctcgcgcagc
ctgtcgtacaacggcgcgctgcaggatctcggtactttattgcaccgcattgcgctggcg
caaagcgtgccggccgccttgccgcaggatctgcccgaatacgcggacatcgtgcgcctg
gccgccgccttcgatgcggaagaagtgcagctgttttaccagatcgccgtgcatggccgc
aatgaactgggcctggcgcccgacgaatatgcgggctttaccatgaccttgctgcgcatg
ctggcctttcggcccggcataggcggcgccgatggcgtgccggctgccgcacctgcgtcg
gctccgggcaatcgtcccgctgccgtggccgccgcgcgcgcggcagcaggcgcgtccgca
ccggccgcccgcgccgccacgaacagcgtggccagccatgctgccgtgacgccacctgcc
gtcgtggccgctgccgccgccagcctggcgcgcagcgaagcgccgccgccgcgcgcgccg
gcagccgtatcggcaccagcaccagcaccagcaccagcggcggcgccgcccgccgccgcc
ccggctgccgcgccagccgcagctgcgtcggcagcgcccgctgcaccgctcagttccgcc
cgcgccgccatcaatgcggcgctggaagcggcccgcgccgcctcgaaaggccgtcccggc
agcgcgccgtcggcgccttcctcggcgcccaagcccgccgcgccggcaccggccgccgcc
gtagccgcgccagccaccgccccggccgtgcctgtccaggctgcgccgccaccgcctgcc
gccgcgaaagcgccggcgccgtgggacgacgcgccaccggtggccgtgatggacgcgccg
gtagtcgcgcccgcgcccgtgcagcaggcgcgtcctgcggcggcgccacagcaggcgccg
gccgacgacgacttgccgccatgggtcaccgaattctccgacgacagcgcctcggccgcc
gtctcggcgccggctggcgcgccagccatgcaaggcaacgagcagccggccgtcatcatg
ccgcagcgtgccgccaagcaagccgcgcccagcgcaccgtatgtgatcacgcccgtgccc
ggcctggactgggacggcaactggccggccgtcgccgccgtgctgcccttgcgcggcgtg
gcccagcagctggccgtgcaggccgagctgatcgaatgcctgcacgacggccacagcacc
acgttccgcctgcgcgtgccgatcgacacgtggcgcagtcccgccaacgtggaaaaactg
gcggccgcgctgaccgagcgcttcgggcgcaaggtgaatgtcgatacggaactgggcgcc
gtctggtacacggccagcgcggaagcgcaggcgcaccgcgaggcgtgccagctgcaagcg
gaagcaaccattgccagcgaccccttcgtgctcgacatgaagcgtgcattcgacgctttt
gtcgtgccgggaacgattacccctgcaccggccggctccgccgcgccgaccctgcattga
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