Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_19555
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Entry
YQ44_19555 CDS
T04539
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YQ44_19555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_19555
Enzymes [BR:
jaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
YQ44_19555
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
YQ44_19555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
APA69611
LinkDB
All DBs
Position
4537442..4538206
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AA seq
254 aa
AA seq
DB search
MKLATWNVNSLKVRLPQVLQWLADNPVDILCLQETKLTDDKFPVADIEAAGYQVVFSGQK
TYNGVAILSKLPITDVVKNNPRYEDAQQRILAATIGGVRVVCAYVPNGQSVDSDKYEYKL
GWLAALHDWLAEEAQQHPQLAVVGDYNIAPDDRDVHDPVAWEGQVLVSDKERAALQRLFD
IGLTDAFRLFEQAEKSFSWWDYRQLGFRLNKGLRIDHILLSPALAGRCTACVIDRVPRKW
EQPSDHAPVVATID
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagccacctggaacgtcaactcgctcaaagtgcgcctgccgcaagtgctgcag
tggctggcagacaacccggtcgacatactgtgcctgcaagaaaccaagctgacggacgac
aagttccccgtcgccgacatcgaggcggccggctaccaggtggtcttcagcggccagaag
acctacaacggcgtggccatcctgtcgaagctgccgatcaccgacgtggtgaagaacaat
ccgcgctatgaagacgcgcagcagcgcatcctggccgccaccatcggcggcgtgcgcgtc
gtctgcgcctacgtgccgaacggccagagcgtcgactcggacaaatatgagtacaagctg
ggctggctggccgccctgcacgactggctggccgaggaggcgcagcagcacccgcagctg
gccgtcgtcggcgactacaatatcgcgcccgacgaccgcgacgtgcacgacccggtcgcc
tgggaaggccaagtgctggtctcggacaaggaacgcgccgccctgcagcgcctgttcgac
atcggcctgacggacgccttccgcctgttcgagcaggcggaaaaatcgttcagctggtgg
gattaccgccagctgggcttccgcctcaacaaaggactgcgcatcgaccacatcctgctg
tcgcccgccctggctggccgctgcacggcttgcgtgatcgaccgcgtgccgcgcaagtgg
gaacagccgtccgaccacgcgcccgtcgtcgccaccatcgactga
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