Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_23050
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Entry
YQ44_23050 CDS
T04539
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03420
Nucleotide excision repair
jaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YQ44_23050
03430 Mismatch repair
YQ44_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_23050
Enzymes [BR:
jaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YQ44_23050
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YQ44_23050
MMR (mismatch excision repair)
Other MMR factors
YQ44_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ddrB-ParB
Motif
Other DBs
NCBI-ProteinID:
APA70190
LinkDB
All DBs
Position
complement(5329897..5332206)
Genome browser
AA seq
769 aa
AA seq
DB search
MQNLLHNLNPEQYAAVTLPAQHALILAGAGSGKTRVLTTRIAWLIQTQQVSPAGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRTHYRDAALPQTFQILDSQDQLSV
IKRLLKANNIDDEKFPPKTVMYFINNAKDQGLRATDVEAYDAHERKMVELYQLYDDQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQARFRHILVDEFQDTNNLQYNWLKLLAGHGSRD
GGALFAVGDDDQSIYAFRGANVGNMSAFEHEFQVQNLIKLEQNYRSHGHILDSANLLIAN
NSKRLGKNLRTDAGHGEQVRVYEASSDLQEAQWIIEEAKSLIADGASRSEIAILYRSNAQ
SRVIEHALFSAGMPYHVYGGQRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
MRSIEQLQAASEQYGISLYAAVPYVAGKAGSVLAGFVKLVEGVRFETQQLSLPEMVRVVL
EASTLLQHYQNEKEGADRIENLEQMVSAASQFISEEGFGQGAPAHLGPAAQAQSGAPVVN
QDGIEILDADAPLPAVMSPLSAFLSHASLEAGDNQAQAGQDALQMMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEDNGVEEERRLMYVAITRARKRLYMSFSQTRMLHGQTRYNMKSR
FFDELPEESLKWLSPKVQANWFGNRKSAWDEAPRVASLGSDNAIAQKIAQKATGGGWRIG
ESVAHAKFGEGVIVNIEGGGGNARAQINFGQHGMKVLDLGIAKLERLGR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttcttcacaacctcaatcccgaacaatacgctgccgtcaccttgccggcc
cagcatgcgctgatcctggcgggcgccggttcgggcaagacccgcgtgctgaccacccgc
atcgcgtggctgatccagacccagcaggtatcgccggccggcatcctggccgtgaccttt
accaacaaggccgccaaggaaatgctcacgcgcctgtcggccatgctgccaatcaacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcctgctgcgcacgcactac
cgcgacgcggccttgccgcagaccttccagatcctcgattcgcaggatcagttgtcggtg
atcaagcgcttgttgaaggcaaacaatattgatgatgagaagttcccgccgaagacggtg
atgtatttcatcaacaacgccaaggaccagggcttgcgcgccacggatgtggaagcgtat
gacgcgcacgagcgcaagatggtcgagctgtaccagctgtatgacgaccagtgccagcgc
gaaggcgtggtcgatttcgcggaattgctgctgcgcacgtacgagttgctgagccgcaac
cagcccttgcgcgagcactaccaggcgcgcttccgccacatcctggtggacgagttccag
gatacgaataacctgcaatacaactggctcaaattgctggccggccacggcagccgcgat
ggcggcgccctgtttgccgtcggcgacgacgaccagagcatctacgcgttccgcggcgcc
aacgtgggcaatatgagcgccttcgagcatgaattccaggtgcagaacttgatcaagctc
gagcagaattaccgctcgcacggccatatcctcgacagcgccaacttgttgatcgcgaac
aatagcaaacgcctgggcaagaacttgcgcacggacgcgggccatggcgagcaggtgcgc
gtgtacgaagccagctccgacctgcaggaagcgcagtggatcatcgaagaggcgaagagc
ctgattgccgatggcgcctcgcgcagcgaaatcgccattttgtaccgctcgaatgcgcag
tcgcgcgtgatcgaacatgcgctgttctcggccggcatgccctaccatgtgtatggcggc
cagcgctacttccagcgcgccgaggtcaagcatgcgattgcttacctgcaattaatggac
aatccgcacaacgattcggccttcttgcgcgtggtcaacttccccacgcgcggcatcggc
atgcgctcgatcgagcaattgcaggccgcctccgagcagtacggcatctcgctgtacgcg
gccgtgccgtacgtggcgggcaaggcgggcagcgtgctggccggcttcgtcaagctggtc
gaaggcgtgcgcttcgaaacgcagcagctgtcgctgccggaaatggtgcgcgtggtgctg
gaagcgagtaccttgctccagcactatcagaatgaaaaggaaggcgccgaccgcatcgag
aatctggaacagatggtcagcgcggccagccagttcatttccgaggaaggcttcggccag
ggcgcgcccgcgcacctggggcctgccgcccaggcgcagtcgggcgcgcccgtcgtcaac
caggatggcatcgagatcctcgacgccgacgcgccgttgccggccgtgatgtcgccgctc
tccgccttcctctcgcacgcgtcgctggaagcgggcgacaaccaggcgcaggcgggccag
gatgcgctgcagatgatgaccgtgcattcggccaagggcctggaattcgacaatgtgttc
attaccggcctggaagagggcctgttcccgcacgaaagcagctcgaaggaagacaacggc
gtggaagaggaacggcgcctgatgtacgtggcgatcacgcgcgcgcgcaagcgcctgtac
atgagtttttcgcagacgcgcatgctgcacggccagacgcgttacaacatgaagtcgcgc
ttcttcgacgaattgccggaggaatcgctgaaatggctgtcgccgaaggtgcaggcgaac
tggttcggcaaccgcaagtcggcgtgggacgaggcgccgcgcgtggccagcctgggctcg
gacaatgcgattgcgcaaaagatcgcacaaaaagccacgggcggcggctggcgcatcggc
gaatccgtggcgcacgccaagttcggcgaaggcgtgatcgtcaatatcgaaggcggcggc
ggcaatgcgcgcgcgcagatcaacttcggccagcatggcatgaaggtgctcgacctcggt
atcgccaagctggaacgactgggacgttaa
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