Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_27530
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Entry
YQ44_27530 CDS
T04539
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YQ44_27530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_27530
Enzymes [BR:
jaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YQ44_27530
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YQ44_27530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
ADDB_N
AAA_19
nSTAND_NTPase5
PhoH
Motif
Other DBs
NCBI-ProteinID:
APA70949
LinkDB
All DBs
Position
6339706..6341736
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AA seq
676 aa
AA seq
DB search
MPQCILKVALDTPLNALFDYRWQAGADADAALPQVGQLALVPFGRREVMGLIVGVSDSTD
VPDAKLKEVLAVRSQLAPLSAQWLALAAFAADYYQRPLGEVALPGLPKNLRVLTTVALDR
AIKKLAKLADAHDGTPLNMPALNPAQQEAADAIGGAQGFQPTLLYGVTGSGKTEVYLQAC
AQVLARDEAAQILILVPEINLTPQLEGNIRARFPGVMLATLHSSLSEGERMLHWLAAHQG
QARIVLGTRLAILASLPQLKLIVIDEEHDPSYKQQEGLRYSARDLAVWRAWQLQIPIVLG
SATPSLESWHHAQTGRYRKLELRERAVKNAVLPRVKILDMERDKPKDGLTSHLVAALKLR
MERGEQSLLFLNRRGYSPVICCESCGWISNCTRCTSFMVLHKPEHRLRCHHCSLELRIPR
HCPTCGNVDLQPLGRGTQRVEEGLQQLFPEARILRIDADSTRKKGSAQEAFDTVHRGEVD
ILIGTQMVAKGHDFKKLTLVGILNPDTALFSQDYRASERLFAQLMQVAGRAGRAAQTEGG
SVSEVLIQTRYARHPLYDAVVNHDYDHFATTLLEERAQAALPPYLFQALLRAEAPELATA
IEFLQAAKECMEHPQVTINDPIPMSMTRVYNVDRAQLLLESPSRPALQAFLKEWLGELRA
MKTRVKWSLEVDPLDI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagtgcatcttgaaagtcgcgctcgacacgcccctgaacgccctgttcgactac
cgctggcaggcgggggccgacgctgacgcggcattgccgcaggtggggcagctggcgctg
gtgccgttcggccggcgtgaagtgatggggttgatcgtcggcgtgtccgacagcaccgac
gtgcccgacgcgaaattgaaggaggtgctggccgtgcgcagccagctggcgccgctgtcg
gcacagtggctggcgctggccgcctttgccgccgattactaccagcgtccgctgggcgaa
gtggcgctgccgggcttgccgaagaatttgcgcgtgctgacgacggtggcgctcgaccgc
gccatcaagaagctggccaagctggccgacgcgcatgacggcacgccgctgaacatgccg
gcgctcaatccggcgcagcaggaagcggccgacgccatcggcggcgcccagggttttcaa
ccgaccctgctgtatggcgtgacgggcagcggcaagacggaagtgtatctgcaggcgtgc
gcccaggtgctggcgcgcgacgaggcggcgcaaatcctgatcctggtgccggaaatcaac
cttacgccccagctcgaaggcaatatccgcgcgcgctttcctggcgtcatgctggccacc
ctgcacagcagcctgtccgagggcgagcgcatgctgcactggctggccgcccaccagggc
caggcgcgcatcgtgctcggcacgcggctggccatcctggcgtccttgccgcagctcaag
ctgatcgtcatcgacgaggagcacgacccgtcctacaagcagcaggaaggcttgcgctat
tcggcgcgcgacctggccgtgtggcgcgcctggcaattgcagattcccatcgtgctcggt
tcggccacgccgtcgctggaaagctggcaccatgcgcagacggggcgctaccgcaagctg
gaattgcgcgagcgggccgtcaagaatgccgtcttgccgcgcgtcaagatactcgacatg
gagcgcgacaagccgaaagatggcttgacgtcgcacctggtggcggcattgaagctgcgc
atggagcgcggcgagcagtcgctgctgttcctgaaccggcgcggttattctcccgtcatc
tgctgcgaatcgtgcggctggatcagcaattgcacgcgttgcacctcgttcatggtgctg
cacaagcccgagcaccgcttgcgctgccatcattgcagcctggaattgcgcatcccccgt
cactgtcctacctgcggcaacgtcgacttgcagccgctgggacgcggcacgcagcgcgtg
gaagaaggcttgcagcaattgtttcccgaggcgcgcatcctgcgcatcgacgccgattcc
acgcgcaagaagggcagcgcgcaggaagcgttcgataccgtgcaccgcggtgaagtggat
atcctgatcggcacgcagatggtggccaagggccacgacttcaagaaactgacgctggtc
ggcatattgaatccggacacggctctgttttcccaggattaccgtgccagcgagcggttg
ttcgcccagctgatgcaggtggcgggccgggccggacgggcggcgcagacggagggcggc
agcgtttccgaagtgctgatccagacgcgctatgcgcgccatccgctgtacgacgccgtc
gtcaaccacgattacgaccatttcgccaccaccctgctggaagagcgggcccaggcggcg
ctgccgccgtacctgttccaggccctgctgcgcgcggaagcgcccgagctggccacggcc
atcgaattcctgcaggcggccaaggaatgcatggagcacccgcaggtcaccatcaatgat
ccgattcccatgagcatgacgcgcgtctacaacgtcgaccgcgcccagctgctgctggag
tccccctcgcggcccgccctgcaagcgtttttaaaagaatggctgggggaattgcgcgcc
atgaagacgcgcgtgaaatggtcgctggaagtggacccgctggatatctga
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