Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_27975
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Entry
YQ44_27975 CDS
T04539
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jaz03032
]
YQ44_27975 (gyrB)
03400 DNA repair and recombination proteins [BR:
jaz03400
]
YQ44_27975 (gyrB)
Enzymes [BR:
jaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YQ44_27975 (gyrB)
DNA replication proteins [BR:
jaz03032
]
Prokaryotic type
DNA Topoisomerases
YQ44_27975 (gyrB)
DNA repair and recombination proteins [BR:
jaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YQ44_27975 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
APA71024
UniProt:
A0A1I9Y4T2
LinkDB
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Position
complement(6448239..6450737)
Genome browser
AA seq
832 aa
AA seq
DB search
MSENPQDTPIQAKTEEYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DESLAGHCTEIHVTIHSDNSISITDNGRGVPTGLKMDDKHDPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKVHHMEFVRGVPQDRQIVMVGDIATS
PIKVIGETDKRGTDVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVNIKLSDQRTGKE
EIFAFEGGTRGFVEYINKAKSVLHPTIFQATGERMSDQGTNISVDVSMQWNDAYNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIDEHEFAKKAKVEISGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRGPVEEIVAKTLADYLQEKPNDAKIICGKIVEAARAREAARKA
RDLTRRKGIMDGLGLSAKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRG
KVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNVEKLRYHRIIIMTDADVDGAHIRT
LLLTLFYRQMPQLVERGHIYIAQPPLYKVKAGRDERYLKDDAEEASYMMTVALNTAVLVP
KEGAEGISGETLAELVRKFNLSNTIMTRLTRVIDRAALTAIMTGVQLDLSTLDLAEASAL
ALQTAINDSAVQVRVRSDDLSEKHMLRIERMHHGNVKVSAIDAEFVQGPDYAVLSNGAAT
FEGLIGEGAFVRRGEGERVKEIAVVDFHQAMQWLRDEAERTVSKQRYKGLGEMNPDQLWE
TTMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIENNALRAGNIDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaatccacaagacaccccgatccaggccaaaacggaagaatacggcgccgcc
tccatccagatcctggaaggcctggaagccgtacgcaaacgcccgggcatgtacattggc
gacacctcggacggcaccggcttgcaccatctggtattcgaagtgctggacaactcgatc
gatgaatcgctggccggccactgcacggaaatccacgtcaccatccacagcgacaattcg
atctcgatcaccgacaatggccgcggcgtgccgaccggcctgaaaatggacgacaagcac
gatccgaagcgttcggcggcggaaatcgtcatgaccgaattgcacgcgggcggcaagttc
gaccagaactcgtacaaagtatcgggcggtttgcacggcgtcggtgtgtcctgcgtcaat
ggcctgtcgaaattgctgaagctgaccatccgccgcgacggcaaagtgcatcacatggaa
ttcgtgcgcggcgtgccgcaagaccgccagatcgtcatggtcggcgacatcgcgacgtcg
ccgatcaaggtcatcggcgaaacggacaagcgcggcaccgacgtgcatttctgggccgac
gaagaaatcttcacgcacgtggaattccactacgaaatcctggccaagcgcatccgcgaa
ctgtccttcctgaacaatggcgtcaacatcaagctgtcggaccagcgcacgggcaaggaa
gaaatcttcgccttcgaaggcggcacgcgcggtttcgtcgagtacatcaacaaggccaag
tcggtcttgcacccgaccattttccaggccacgggcgagcgcatgtcggaccagggcacg
aatatctcggtcgacgtgtcgatgcagtggaacgatgcctacaacgaacaggtgctgtgc
tttacgaataacatcccgcaacgcgacggcggcacccacctgacgggcttgcgcgcggcc
atgacgcgcgtgatcaacaaatacatcgatgaacacgagttcgccaagaaggcgaaagtg
gaaatcagcggcgacgacatgcgcgaaggcctgacctgcgtgctgtccgtgaaagtgccg
gaaccgaaattctcgtcgcagacgaaagacaagctggtgtcctcggaagtgcgcggcccg
gtcgaagagatcgtcgccaagaccctggccgattacctgcaagaaaaaccgaacgacgcc
aagatcatttgcggcaagatcgtcgaagcggcgcgcgcgcgcgaagcggcccgcaaggcc
cgcgacctgacccgccgcaagggcatcatggacggcctgggcctgtcggccaaactggcc
gactgccaggaaaaagaccccgccctgtgcgaactgtacatcgtcgagggtgactcggca
ggtggctcggcaaaacaggggcgcgaccgcaagttccaggccatcctgccgctgcgcggc
aaggtcctgaacgtggaaaaagcccgtttcgagaaaatgctgtcgtcggagcagatcacc
accctgatcgccaccctgggcacctcgatcggtccggacgagttcaacgtcgagaaactg
cgctaccaccgcatcatcatcatgaccgatgcggacgtcgacggcgcccacatccgcacc
ctgctgctgaccctgttctaccgccagatgccgcaactggtcgaacgcggccacatctac
atcgcccagccgccgctgtacaaggtgaaggccggccgcgacgagcgctacctgaaagat
gatgccgaggaagcaagctacatgatgacggtggccctgaacacggccgtgctggtgcca
aaggaaggcgcggaaggcatttccggcgaaaccctggccgaactggtgcgcaagttcaac
ctgtcgaacaccatcatgacgcgtttgacgcgcgtcatcgaccgcgccgccctgacggcc
atcatgacgggcgtgcagctggacctgtcgaccctggacctggcggaggcgtcggcgctg
gccctgcaaacggccattaacgacagcgccgtgcaagtgcgcgtgcgctccgacgacctg
tcggaaaaacacatgctgcgcatcgagcgcatgcaccacggcaacgtgaaagtcagcgcc
atcgacgccgagttcgtgcaaggccccgactacgccgtgctgagcaatggcgccgccacc
tttgaaggcttgatcggcgaaggcgccttcgtgcgccgcggcgaaggcgagcgcgtcaag
gaaatcgccgtcgtcgacttccaccaggccatgcaatggctgcgcgacgaagccgagcgc
acggtctcgaaacagcgctacaagggtctgggcgagatgaatccggaccagctgtgggaa
accacgatggacccgaccgtgcgccgcctgctgaaggtacagatcgaagacgccattgcg
gcagatcaaatcttcacgaccttgatgggcgacgacgtggaaccacgcagagcgttcatt
gagaataatgcgttgcgggcggggaatatcgacgtgtaa
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