Janibacter cremeus: O9K63_01915
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Entry
O9K63_01915 CDS
T08913
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
jcr
Janibacter cremeus
Pathway
jcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O9K63_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcr03019
]
O9K63_01915
03009 Ribosome biogenesis [BR:
jcr03009
]
O9K63_01915
Enzymes [BR:
jcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
O9K63_01915
Messenger RNA biogenesis [BR:
jcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O9K63_01915
Ribosome biogenesis [BR:
jcr03009
]
Prokaryotic type
rRNA processing factors
O9K63_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
WEV78576
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All DBs
Position
419397..422234
Genome browser
AA seq
945 aa
AA seq
DB search
MAPENEHAEESTEATAPADQPEQTEDEQTEDEQTPEQAPAAAPGFGLLFQPPTPVAAPPR
RQRDPEPYDDEDEDEQDSARDSDDSDTPQGDDSDNQQGEGGRNRRRRRGGRGRNRSSDSS
DGPDSDDDGSSGSGSSKSSSKDSPKETSKDSSKDSSDDSSDDEDDDQKSSGGRGRGRGRG
RGRGNGSSGQDERSSDSGDDDNDNDDDSDTDSGDEDQSSGSSRRRRRRRRGGGGSGGGNG
GGSGGGNGGGGSGQDDPPGTVTKVRESRRSEPQAIKGSTRLEAKKQRRREGREAGRRRTV
ITEAEFLARRESVERVMVVRQQGDRTQIGVLEDGVLVEHYVSRETTSTMVGNVYLGRVQN
VLPSMEAAFIDIGKGRNAVLYAGEVNWDAQGVGNGQARRIENALSSGDSVLVQVTKDPIG
HKGARLTSQVSLPGRYLVYVPEGNMTGISRKLPDTERSRLKSILKQVVPDSSGVIVRTAA
EGASEQELTADVERLTKAWSRISDKAEAKKGKKTSAGGAPTLLHAEPDMTVRVIRDIFNE
DFAKMVVSGDGAWEEIKRYVDDVAPDLADRLEKWTGDRDVFAEHRIDEGISKAMDRKVWL
PSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIV
VDFIDMVLEANRDLVVRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGSGLIDVFSENC
EACNGRGIIVHNEPVAHDHGGNGGGGSGSGGGGGGKSRRGRGKGGSDKDPQPKPAPEEER
DANGRTAAQIAAAAHAAAVKSIAEPGAGEDVAVGDPGARTPALEPEEPKKGEAPEPEPEA
PAPEPAVVEATPEAAPEPEPEKKPARRRAGRRAASSAGAPVALEPVDLTAPAATASAPLT
SIAGESGEAPTTPVADPPAEPATPPRRKRKRVTAQAGPPAPEATD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgagaacgagcacgccgaggaatcgaccgaggccaccgccccggccgaccag
cccgagcagaccgaggacgagcagaccgaggacgagcagaccccggagcaggcgcccgcc
gccgcaccgggcttcgggctcctcttccagccgcccacccccgtcgccgccccgccccgc
cgtcagcgcgacccggagccgtacgacgacgaggacgaggacgagcaggactccgcccgg
gactccgacgacagcgacaccccgcagggtgacgactcggacaaccagcagggcgaaggg
ggccgcaaccggcgtcgccgccgtggcgggcgcggtcgcaaccgctcctccgactcctcc
gacggccccgactccgacgacgacggctcgagcgggtcgggctcctccaagagctcgtcc
aaggactcgccgaaggagacctcgaaggattcctcgaaggactcttcggacgactcctcc
gacgacgaggacgacgaccagaagtcctccggtggacgtggccgcggccgcggccggggt
cgaggccgcggcaacggctcttcggggcaggacgagcgctcgtccgactccggcgatgac
gacaacgacaacgacgacgactccgacaccgactcgggcgacgaggaccagtcctcgggc
agctcgcgtcgtcggcgccgtcgccgccgtggtggcggcggcagtggtggtggcaacggc
ggcggcagcggtggcggaaacggtggtggcggctccgggcaggacgacccgcccgggacc
gtgaccaaggtccgcgagtcgcgccgcagcgagccgcaggccatcaagggcagcacccgc
ctggaggcgaagaagcagcgtcgccgcgagggccgcgaggccggtcggcgccgcacggtc
atcaccgaggcagagttcctcgcccgccgcgagagcgttgagcgggtcatggtcgtgcgc
cagcagggtgaccgcacccagatcggcgtcctcgaggacggcgtgctcgtcgagcactac
gtctcccgggagacgacctcgacgatggtcggcaatgtctacctcggccgcgtgcagaac
gtgctgccgagcatggaggccgccttcatcgacatcggcaagggccgcaacgcggtgctc
tacgccggtgaggtcaactgggacgcgcagggtgtcggcaacggccaggcccggcggatc
gagaacgccctctcctccggcgactcggtcctcgtccaggtgacgaaggacccgatcggc
cacaagggcgcgcgactgacctcgcaggtctccctccccgggcgctacctggtctacgtg
cccgagggcaacatgaccggcatctcccgcaagctgcccgacaccgagcgctcacgcctg
aagtccatcctcaagcaggtcgtcccggacagctccggcgtcatcgtgcgcaccgccgcc
gagggggcctccgagcaggagctgaccgccgacgtcgagcggctgacgaaggcctggtcg
aggatcagcgacaaggccgaggccaagaagggcaagaagacctccgcgggcggcgccccg
acgctcctgcacgccgagccggacatgaccgtgcgcgtcatccgcgacatcttcaacgag
gacttcgcgaagatggtcgtctccggcgacggtgcgtgggaggagatcaagcgctacgtc
gacgacgtcgcccccgatctggccgaccgcctcgagaagtggaccggcgaccgggacgtc
ttcgccgagcaccgcatcgacgaggggatctccaaggcgatggaccgcaaggtctggctg
ccctcgggtggttcgctcgtcatcgaccgcaccgaggcgatgaccgtcgtcgacgtcaac
accggcaagttcaccggctccgggggcaacctcgaggagacggtgacgaagaacaacctg
gaggccgccgaggagatcgtgcggcagctgcggttgcgcgacatcggcggcatcatcgtc
gtcgacttcatcgacatggtcctcgaggccaaccgcgacctcgtcgtccggcgcctgctg
gagtgcctggggcgcgaccgcaccaagcaccaggtcgccgaggtcacctcgctcggcctg
gtccagatgacgcgcaagcgggtcggttccggcctcatcgacgtcttctccgagaactgc
gaggcctgcaacggccgcggcatcatcgtccacaacgagccggtggcccacgaccacggc
ggcaacggcggcggtggctccggcagcggtggcggtggcggcggcaagtcccgacggggc
cgcggcaagggcggcagcgacaaggacccgcagccgaagcccgcgcccgaggaggagagg
gacgccaacgggcgcaccgcggcccagatcgcggccgctgcccacgcggccgcggtcaag
agcatcgccgagcccggcgccggcgaggacgtcgctgtcggcgacccgggggcgaggacc
cccgcactggagccggaggagccgaagaagggcgaggcgcccgagcccgagcccgaggcg
cccgcccccgagccggcggtcgtggaggcaacccccgaggctgcccccgagcccgagccc
gagaagaagccggctcgacgtcgtgccggtcgccgtgcggcctccagcgcgggtgccccg
gtggctctcgagccggtcgacctgaccgcccccgcggccaccgcgagcgcaccgctgacg
tcgatcgcgggggagagcggggaagcccccacgacccccgtcgccgaccccccggccgag
ccggccaccccgccgcgtcgcaagcgcaagcgcgtcaccgcccaagcggggccgccggcg
cccgaggccacggactga
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