Janibacter cremeus: O9K63_04075
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Entry
O9K63_04075 CDS
T08913
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jcr
Janibacter cremeus
Brite
KEGG Orthology (KO) [BR:
jcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jcr03016
]
O9K63_04075
Enzymes [BR:
jcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
O9K63_04075
Transfer RNA biogenesis [BR:
jcr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O9K63_04075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WEV78987
LinkDB
All DBs
Position
complement(893975..895210)
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AA seq
411 aa
AA seq
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MSSGPAKGREEESTKAPLPLLAEPAEGVPDVITRESELIACADAISAGVGPVALDAERAS
GYRYGQAAYLVQLRREGSGTWLIDPVFLPDLQPVDEAIGTGEWILHAATQDLACLRDVGL
VPRQIFDTELGARLLGLPRVGLAAVIEHYLGISLAKEHSAVDWSTRPLPEPWLRYAALDV
EVLTEVRNLMGADLAAQGKSEWARQEFTALLDWRPTQRQDPWRRTSGLHKIRQPRILATV
RELWWERDRIARERDTSPGRVIPDAALVEIAQAAPAGPGDLPRGHRAIQRSQRAWLAAVE
RARELGDDELPPPTLKSDGPPPQRSWANRDPLAAERLTATRAALTAFAEEHTIPIENVCS
PDPLRRVVWSPPSERGTEGFAAALAEHGVRPWQQEIVAPLLVAAFEAHPDA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgagctcgggaccggcgaagggcagggaggaggagtccacgaaggcacccctcccgctg
ctcgccgaacccgccgagggtgtccccgacgtcatcacgcgcgagtccgagctgatcgcg
tgcgcggacgcgatctcggccggcgtcggacctgtcgccctggatgccgagcgcgcctcc
ggctaccgctacgggcaggccgcctacctggtgcagctgcgacgtgagggctcggggacc
tggctgatcgacccggtcttccttcccgacctccagcccgtcgacgaggcgatcgggacc
ggtgagtggatcctgcacgcagccacccaggacctcgcctgcctgcgcgacgtcggactg
gtgccacgacagatcttcgacaccgagctcggcgcccgcctgctcgggctgccccgggtg
gggctggccgccgtgatcgagcactatctcgggatctcgttggccaaggagcactcggcc
gtcgactggtccacccgccccctgccggagccatggttgcgttatgcggccctcgacgtc
gaggtgctcaccgaggtgcgcaacctcatgggagccgatctcgcggcacagggcaagtcg
gagtgggcgcgtcaggagttcaccgcgctcctggactggcggcccacccagcgccaggac
ccgtggcgacggacctccggcctgcacaagatccgccagccccgcatcctggccaccgtg
cgcgagctgtggtgggagcgcgaccggatcgcccgtgagcgcgacacctcccccgggcgc
gtgatccccgacgcggccctggtcgagatcgcgcaggccgcgccggcgggcccgggcgac
ctgccccgcggtcaccgcgccatccagcgcagccagcgtgcctggctcgccgccgtcgag
cgcgcccgtgagctgggggacgatgagctgccgccaccgacgctgaagtcggacggcccc
ccgccgcagcgctcgtgggccaaccgcgacccgctcgccgcggagcggctgacggcgacc
cgtgccgcgctcacggccttcgccgaggagcacacgatcccgatcgagaacgtctgctcc
cccgacccgctgcggcgcgtagtgtggagcccgccgagcgagcggggcaccgagggcttc
gccgcggccctcgccgagcacggcgtgcgcccgtggcagcaggagatcgtcgcgccgctg
ctcgtcgcggccttcgaggcacacccggacgcgtag
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