Janibacter cremeus: O9K63_15430
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Entry
O9K63_15430 CDS
T08913
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
jcr
Janibacter cremeus
Pathway
jcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O9K63_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcr03021
]
O9K63_15430
03400 DNA repair and recombination proteins [BR:
jcr03400
]
O9K63_15430
Enzymes [BR:
jcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O9K63_15430
Transcription machinery [BR:
jcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O9K63_15430
DNA repair and recombination proteins [BR:
jcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O9K63_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PSV_ORF131-like_dom
Motif
Other DBs
NCBI-ProteinID:
WEV77958
LinkDB
All DBs
Position
3225453..3229334
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRAWSHGEVKKPETINYRTLKPEKEGLFCERIFGPTRDWEC
SCGKYKRVRFKGIICERCGVEVTRAGVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEEQRHTDLPSLEAQIEAEKKELENRRDADVEKRAQKLEKD
IAELETEGAKSDAKRKVRDSAEREMNQIRKRADQQVERLSQVWDRFKNLKVQDLEGDEML
YREMRDRFGLYFEGGMGAAALQKRLESFDLDAESEKLREIIATGKGQKKTRALKRLKVVT
AFQTTDNKPAGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQESVDNLFDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLDHAQNIKSAKRMVERQR
SVVWDVLEEVITEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVIGLFHLTSEVAREGEHLR
SFTSTAEAQMALDAGEIKVGSPIRIRLEDIVPTPGVELPEGAEPNEAGQLATWTTETTLG
RALFNATLPVDYPYVNEPVDKKQLSTIVNNLAERYSKVQVAASLDALKEAGFYWASRSGT
TVAVSDVVTPERKPEILAIYEEKATKVQKQYERGLITDDERRQEQIEIWTQATNEVAAEM
QGNFPTDNPIYRMVSSGARGNWFQLRQIAGMRGLMANPKGEIIPRPIRTNFREGLSVVEF
FISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTSRGLAMPIAQFDELTG
TRRLHDDVEFTAYGRCVATDVEHEGTVMAEAGSDLGDVVIDRLYAAGVDEVKIRSVLTCD
SKVGTCAKCYGRSLATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITQGL
PRVVELFEARTPKGVAPIAEADGRVTIEETDKGRRILLVADRDGEEHAYPVTKRSRLLVE
DGQRVPVGTQLVQGAIDPKQVLRILGPRHAQKHLVDEVQNVYRQQGVSIHDKHIEVIVRQ
MLRRITILESGDTGLLPGMLAERAQFETQNRRVVSEGGRPASGRPELMGITKASLATDSW
LSAASFQETTRVLTEAAMEGRSDPLLGLKENVILGKLIPAGTGLPRYRNVDVEPTEEAKA
AMYSLPNYDEYAYPVFGPGSGEAIRLDDLDLDV
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagttgcgcatcggcctcgccactgcggaggacatc
cgcgcctggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggagaaggaaggcctcttctgcgagcgcatcttcggccccacccgggactgggagtgc
tcctgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcggtgcggcgtc
gaggtcactcgcgccggcgtgcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtcacccacatctggtacttcaagggtgtcccgtcgcggctgggttacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcctacatgatcacgagcgtcgac
gaggagcagcgccacacggacctgccctcgctcgaggcccagatcgaggccgagaagaag
gagctggagaaccgccgcgacgccgacgtggagaagcgcgcgcagaagctcgagaaggac
atcgccgagctcgagaccgagggcgccaagtccgacgccaagcgcaaggtccgcgactcc
gccgagcgcgagatgaaccagatccgcaagcgggccgaccagcaggtcgagcgcctcagc
caggtctgggaccggttcaagaacctcaaggtccaggacctcgagggcgacgagatgctc
taccgcgagatgcgtgaccgcttcggtctgtacttcgagggtggcatgggcgccgcggct
ctccagaagcgtctggagagcttcgacctggacgccgagtcggagaagctgcgcgagatc
atcgcgaccggcaagggccagaagaagacccgcgccctcaagcgcctcaaggtcgtcacc
gccttccagaccacggacaacaagccggccggcatggtcctggacgccgtcccggtcatc
ccgccggacctgcgtccgatggtccagctcgacggtggccgcttcgccacctcggacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgacttcttgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacaac
ctcttcgacaacggtcgtcgcggtcgtgcggtcaccggtccgggcaaccggccgctgaag
tccctgtcggacatgctcaagggcaagcaggggcgcttccgccagaacctcctgggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagcccttcgtgatgaagcggctg
gtcgacctcgaccacgcccagaacatcaagtcggccaagcgcatggtcgagcgtcagcgc
tcggtcgtgtgggacgtcctcgaagaggtcatcaccgagcacccggtcatgctcaaccgt
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagttggtcgagggcaag
gccatccagatccacccgctcgtgtgcaccgccttcaacgcggacttcgacggtgaccag
atggccgtccacctcccgctgagcgcggaggcccaggccgaggcccggatcctgatgctc
tcgagcaacaacatcctcaagccggccgacggccgccccgtcaccatgccgacccaggac
atggtcatcggcctgttccacctcacctccgaggtggcgcgcgagggcgagcacctgcgg
tccttcacctcgaccgccgaggcccagatggccctggacgccggggagatcaaggtcggg
agcccgatccggatccgcctggaggacatcgtgccgacgcccggtgtcgagctgcccgag
ggtgccgagccgaacgaggccggtcagctggccacgtggaccacggagacgaccctggga
cgcgcgctcttcaacgcgacgctcccggtggactacccctacgtcaacgagccggtcgac
aagaagcagctgtcgacgatcgtcaacaacctcgccgagcgctactccaaggtgcaggtt
gccgcgtcgctcgacgccctcaaggaggccggtttctactgggcctcccgctccggcacg
accgtggccgtctccgacgtcgtcacgcccgagcgcaagccggagatcctcgcgatctac
gaggagaaggcgaccaaggtccagaagcagtacgagcgcggtctgatcaccgacgacgag
cgtcgtcaggagcagatcgagatctggacccaggcgacgaacgaggtcgccgccgagatg
cagggcaacttcccgacggacaacccgatctaccggatggtctcctcgggtgcccgaggc
aactggttccagctgcgtcagatcgccggtatgcgtggcctcatggccaacccgaagggc
gagatcatcccccgaccgatccgcacgaacttccgtgagggcctgtcggtggtcgagttc
ttcatctccacgcacggcgcccgcaagggtctggccgacacggccctgcgcacggccgac
tcggggtacctgacccgtcgtctcgtcgacgtctcccaggacgtcatcgtgcgtgaggag
gactgcggcacctcgcgtggcctggccatgccgatcgcgcagttcgacgagctgaccggc
acgcgtcgtctccacgacgacgtcgagttcaccgcctacggccggtgtgtcgccacggac
gtggagcacgagggcaccgtcatggccgaggccggctcggacctcggtgacgtcgtcatc
gaccgcctctacgcggcaggtgtcgacgaggtcaagatccgctcggtcctcacctgcgac
tccaaggtcggcacctgcgccaagtgctacgggcgttcgctggccacgggtcagctcgtc
gacatcggcgaggccgtcggcatcgtcgcggcgcagtcgatcggtgagcccggtacccag
ctgacgatgcgcaccttccacaccggtggtgtggccggtgacgacatcacgcagggtctg
ccgcgcgtcgtcgagctcttcgaggcccgtacgcccaagggcgtggcgccgatcgcggag
gccgacggccgggtgaccatcgaggagaccgacaagggtcgtcgcatcctgctcgtcgcg
gaccgcgacggcgaggagcacgcctacccggtgaccaagcgttcgcgcctgctcgtcgag
gacggccagcgcgtgccggtcggcacccagctggtccagggcgccatcgacccgaagcag
gtcctgcgcatcctcggcccgcgccacgcgcagaagcacctggtcgacgaggtccagaac
gtctaccgccagcagggtgtctcgatccacgacaagcacatcgaggtcatcgtccggcag
atgctgcgccggatcacgatcctcgagtcgggtgacaccggcctgctcccgggcatgctc
gccgagcgggcgcagttcgagacgcagaaccgccgcgtggtctccgagggcggtcgcccg
gcctcgggtcgtccggagctgatggggatcaccaaggcctcgctggccacggactcctgg
ctctccgccgcctccttccaggagacgacccgcgtcctcaccgaggccgcgatggagggt
cgttcggacccgctgctgggcctgaaggagaacgtcatcctcggtaagctcatcccggcc
ggtacggggctgccccgctaccgcaatgtggacgtcgagcccactgaggaggccaaggcc
gcgatgtactcgctgccgaactacgacgagtacgcctacccggtcttcggtccggggtcc
ggcgaggcgatccgcctcgacgacctcgacctggacgtctga
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