Jatropha curcas (Barbados nut): 105627963
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Entry
105627963 CDS
T03922
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
jcu03015
mRNA surveillance pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105627963
09122 Translation
03013 Nucleocytoplasmic transport
105627963
03015 mRNA surveillance pathway
105627963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105627963
03041 Spliceosome [BR:
jcu03041
]
105627963
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105627963
Spliceosome [BR:
jcu03041
]
Complex C
Other components
EJC/TREX
105627963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
105627963
NCBI-ProteinID:
XP_012064637
UniProt:
A0A067LQN5
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSSKYPILDNRPIDQWKVTELKEELRRRKLTTKGLKDDLIRRLDEALRIERENNEDLDTE
TISDEQPVDGTKVSEAVPIVTEIAKVDMNVVAAKIESVGDVKVQVDINDGAEARDQELAE
CVTRTDTISSRDEGEITIPAVALEVSTTVSESVASGVTIGASDAQNPQAPELNVNSKFQL
ENQDSKPQLEGEECKTQLENSKLQLDNEDSKPQLENEDSKSQLENEGLKPPHEDVTLDSS
TPNNQVSEVSPNLGFQVKSDSISTDSVSINEKIELKDNIITDNVQLELDIVKPEMVEPSS
NSVVPVGGESHPMDVEEPQEKKTVEEKDDSNATNADMSKKNDIVDVGYSEKLNLDRSSGD
DSMEEDVVESKQIDSKYNSDDVGDKSEKSEMHVVKEENLVDVVGNKPSIDNKEMRVENKV
HPPVPAEKRKLNDQNAVGSTEPVKRQRRWNSESLKVPEPQSSNPAPSTTPKDAFQPALSR
RNFSRSDSSVSNEDAPKERVVPPSQRPPTNSLRIDRFVRPFTLKAVQEFLGKTGTITSFW
MDHIKTHCYISYSSVEEAVETRNAVYNLQWPPNGGRLLVAEFVDPHEVKLKVEAPPHSPA
TPVTPSATAAPLSQPQPSPRQQVSRQQLPPPPPLPPPPPLSNPPLAKERVAHLPPPPPLI
PEKHDPPIVTLDDLFRKTKATPRIYYLPLSEEQVAAKLAERGKNANQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaaatatccaattctagacaatcgcccaatagatcagtggaaggttactgaa
ctaaaagaagagcttaggaggcggaaattgacaacaaaaggtttgaaggatgatctgatt
agacgtttagatgaagcacttcgcattgagagggaaaataatgaggacttggacactgaa
actatttcggatgagcaacctgtggatggtacaaaagtttctgaggcagtgccaattgtt
actgaaattgctaaagttgatatgaatgttgttgctgcgaaaattgagagcgtgggtgat
gttaaggttcaggttgatatcaatgatggtgcagaagccagggaccaagaacttgcggaa
tgtgtcacaagaactgatacaatttcttctagggatgaaggggagatcactattcctgct
gttgctctggaggtcagcactacagtttccgagagtgtggcatctggagtaacaattggt
gcttcagatgcacaaaatcctcaagcgcctgaactgaatgtgaattccaagttccagctt
gaaaatcaggattctaagcctcagctggaaggtgaggaatgcaagactcagctggagaat
tccaagcttcagctggacaatgaggattcaaagccccagctggagaatgaggattcaaag
tcccagctggagaatgaggggttgaagcctccacacgaggatgtcacgcttgactcttct
actccgaacaaccaggtatctgaggtcagccctaatttagggtttcaagtaaaatctgat
tctatttctactgattctgtgtcaattaatgaaaagattgaactaaaggataacataatt
actgataatgtccaattagaactagatattgttaagccagagatggtggaaccatcatcc
aatagtgttgtgccagttggtggtgaatcacatccaatggatgttgaggagccacaagag
aagaagacagttgaagagaaagatgacagcaatgctacaaatgcagatatgagcaagaaa
aatgatattgttgatgtggggtactcggaaaagttaaatttagacagaagttctggtgat
gactctatggaggaagatgttgtggagagtaagcaaattgattcaaagtataactctgat
gatgtgggagacaaaagtgagaaaagtgaaatgcatgttgtgaaggaggaaaatcttgtt
gatgttgtagggaacaagccgtctattgataataaggaaatgcgtgttgagaataaagtt
catcctcctgtgcctgctgagaaaagaaagcttaatgatcaaaatgctgttggaagtaca
gagcctgtaaagaggcaacgcagatggaattctgaaagcctaaaagtacctgaaccacaa
agctctaatccagcaccatccactacccctaaggatgcatttcaacctgctctttcaaga
cgcaacttttctcgctctgactcctctgttagcaatgaggatgcaccaaaggaacgtgtt
gttccaccatctcaaagacctccaacaaattctctaagaattgatcgctttgtacgtcct
tttaccctgaaagctgtccaagaatttctaggcaagactgggaccataaccagtttctgg
atggatcacatcaaaacccattgctatataagttactcatctgtagaagaagctgtggag
acacggaatgcagtgtataacttacagtggcctccaaatggcgggcgtcttttagtggct
gagtttgttgatccccatgaagtgaaactgaaagtggaggctcctcctcattctccggct
acaccagtgactccaagtgctactgcagctccactctcgcagcctcagccctctccccgt
cagcaggtttctaggcagcaacttccacccccacctccccttccacctccaccacctcta
tccaacccgcctctggccaaggagcgtgttgcccatctgccaccgccacctccactaatt
ccagagaaacatgaccctccaattgttactctagatgatctctttcggaaaaccaaagca
actccccggatctactatcttccgttgtcagaagaacaagttgcagcaaaacttgcggaa
cggggaaaaaatgccaaccagtag
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