Jatropha curcas (Barbados nut): 105627987
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Entry
105627987 CDS
T03922
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105627987
Membrane trafficking [BR:
jcu04131
]
Protein recycling
Others
EARP complex
105627987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EcoR124_C
LAMB1
Motif
Other DBs
NCBI-GeneID:
105627987
NCBI-ProteinID:
XP_012064662
UniProt:
A0A067LI81
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MQPNLFPFGTVLGNPFLFNGDLTEGGVGVGGFESSRVFFLVPFLLFQGGGMDLSKVGEKI
FNSVRSARSLGLLPSTDRPEVPARAAAAAAVARVLAGLPPHQRFDLPSSSEGLRMIYGSK
SPSHVEEIEQDFYEEDFDPIRHILENIPSEENELEYLEKQAALRLAQLDRVAERLSQQVM
EHHEVMVKGMNLVRELEKDLKVANVICMNGRRHLTSSRNRVSSDLIVNSNSKKKQALLDM
LPILSDLHHAFCMQAALESLVEEGNYCKAFQVLSEYLQLLDSFSEFSAIQEMSRGVEVWL
GRTLQKLDSLLLEVCQEFKEEGYINVVDAYALIGDISGLAEKIQSFFMQEVLSETHSVLK
NIVQEDQEVQMQNSRLTYSDLCLQIPESKFRQCLLRTLAVLFRLMCSYHEIMIFELENKD
WASETCNMLRERDNSWHSGDTQQVDSAAIISSDPQGINGSHSKSVDGRPTEEAIATVPMR
DSMGATNSIHSDSHSQVDETRNDGTGASSSGSPWYHLRKEATAFVSQTLQRGRKNLWQLT
TSRVSVLLSSSAGGSMSIHQFLKNYEDLSVFILAGEAFCGVEAVEFRQKLKVVCENYFVA
FHRQNVHALKMVLEKENWLNLPSDTVQVISFPGLVGDGAPLIAPSDGSSSTNARLNHYKS
LNLVDATAKKNGFTSWVRNENPFSLKLLHGSKEGHSSSLPNGASSGEYGHNNDSYQVDIV
SPKSSDANHMNGTENEDENEDLLADFIDEDSQLPSRISKWTHSRSNSVHWKNDEIAAHTG
SSICLLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFYFVFETFGQQNVNSNGKGLSDS
VNYRLKTALSRISQDCDQWIKAQSTAFPSSPTSLSTYIHADLTPTSPQNHSPAVSFGLKE
RCVAADNISLVARVLHRSKSHLQSILLQSNPAIVEDFYAHLVDSVLDLTAYIHRTTARLL
LHIDGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYRTRLAHGGIHKEVQDLLLEYGL
EIVAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFATVNVKPKLQIVEAFIKAYYL
PETEYVHWARAHPEYSKNQIVGLVNLVAAMKGWKRKTRLDVLEKIE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctcttcccgttcggtaccgttttaggcaatccctttctcttcaatggt
gatttaaccgaaggtggtgtcggtgttggtggattcgagagctctagggttttcttcttg
gtcccttttttattgttccaaggaggtggaatggatttgtctaaggttggagagaagatt
ttcaactccgtacgttctgctagatcgcttggtctcttgccgtcaactgatcggcctgag
gttccagctcgagctgcagctgctgcagctgttgctcgtgttcttgctggactgcctcct
catcaacgattcgatcttccttccagctctgaaggattacgcatgatatatggaagcaaa
tcaccttctcatgtggaggaaatagaacaggacttctatgaagaggattttgatccaatt
agacacatcttagagaatattccatctgaagaaaatgagttagagtatttagagaaacag
gctgctcttaggttagcacaactggatagagttgcagaacgtttatcccaacaagtgatg
gagcatcatgaagtaatggtgaaggggatgaatttagtcagggaattggagaaagacttg
aaggtagcgaatgtcatctgcatgaacggaagaaggcacttgacttcatcaaggaacagg
gtctcaagtgatctcattgtaaattctaattccaaaaagaaacaagctctgttggacatg
cttccaatattgtctgaccttcatcatgcattttgcatgcaagcagcacttgaatcctta
gttgaagaaggcaattactgcaaggcattccaagtcctatctgagtatttgcagctatta
gatagtttttctgagttttcagccatacaggaaatgagccgtggagttgaggtttggctg
ggaagaacccttcaaaagctggattcacttttattagaagtgtgtcaggagttcaaggag
gagggttatataaatgtggttgatgcttatgcattaattggagatatctctggtctagct
gaaaaaatacaaagcttcttcatgcaggaagtcctatcggaaactcactctgtgttgaag
aatattgtacaagaggaccaagaagtacaaatgcaaaatagcagacttacctacagtgat
ctatgccttcagatacctgaatctaagttcaggcagtgtttgttgagaacactagctgtc
ttattcaggttgatgtgctcttatcatgaaataatgatctttgagctagagaacaaggat
tgggcatccgaaacatgcaatatgctaagggaaagggacaactcttggcattctggggat
acccagcaagttgattcagcagcaataatttcttctgatcctcaaggaattaatggctct
cactcaaagtctgtggacggacgaccgactgaggaagctattgccactgtgcctatgaga
gactcaatgggagctactaattccattcattcagattctcattctcaagttgatgagact
aggaatgatggcactggagcatcaagcagcggatcaccttggtatcacttacggaaagaa
gctacagcttttgtttcacaaacccttcagagaggacggaagaatctttggcagcttaca
acaagtcgagtatcagtattgctttcttcttccgcaggtggttcaatgagcattcaccaa
ttcttgaaaaattatgaagatctgagtgtattcatcttggctggtgaagccttctgtgga
gttgaagcagttgagttcagacagaaattgaaggttgtttgtgagaattattttgtagca
tttcatcggcaaaatgttcatgcgcttaaaatggttttggaaaaggaaaattggctgaat
ttgccatcagatacagtacaagttatcagttttcctgggcttgttggtgatggggcaccc
ttaatcgctccatctgatggaagcagctctactaatgccagattgaatcattataaatca
ttgaacttggttgatgccactgcgaagaagaatggttttacaagttgggtcagaaatgaa
aacccattttctctaaaattattgcatggttccaaagaaggtcatagttcttccctacct
aatggggcaagttcaggtgaatatggacataataatgatagctatcaagttgacatcgtg
tctcccaaaagtagtgatgccaatcatatgaatggaactgaaaatgaagatgaaaatgaa
gatctgcttgctgactttattgatgaggatagtcaactcccaagtcgaatttctaagtgg
actcattcaagaagcaactctgtacactggaaaaatgatgagatagctgcacatacagga
tcatctatttgtcttctgaggtcaatggacaaatatgctaggctgatgcaaaaactagaa
atagtgaatgttgagtttttcaaggggatatgccagctgttcgaggttttcttttacttt
gtatttgaaacatttggtcagcaaaatgttaattcaaatggaaaaggtttatctgactct
gtcaattatcgactgaagacggccttatccagaatatcacaggattgtgatcagtggata
aaagcccagtcaacagcatttccgtcatcacccacatctttaagtacatatatacatgca
gatttaacacctactagtcctcagaatcattcaccagccgtatcttttggtctcaaggaa
cgatgcgtagctgctgataatatatctcttgttgctcgagtgttgcacagatcgaaatcg
catcttcagtcgattcttcttcaaagtaacccagctatagtggaggatttctatgcacac
ctggtggattctgtgctggaccttacagcatacattcataggacaactgcaagactactt
ttacatatcgatgggtatgttgaccggattgctaatgctaaatgggaagtaaaagagctt
ggactagagcataatgggtatgttgatttgttgttgggagaatttaagcactatagaacg
aggcttgctcatgggggaattcacaaagaggttcaagatcttctcctagaatatggtctt
gaaattgtagctgaaactcttgttgaaggtctatcacgggtgaagaggtgtactgatgaa
ggccgagctctcatgtctttggatcttcaggttttgatcaatggtctacaacatttcgcc
actgtaaatgtgaagcctaagttacaaatagttgaagcttttattaaggcttactacctt
ccagaaaccgagtatgtgcactgggcccgagctcacccggaatacagtaaaaatcaaatt
gttgggttagtaaaccttgttgctgcaatgaaaggttggaagaggaaaaccaggttggac
gtattggagaagatagagtga
DBGET
integrated database retrieval system
