Jatropha curcas (Barbados nut): 105628072
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Entry
105628072 CDS
T03922
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105628072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628072
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105628072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105628072
NCBI-ProteinID:
XP_012064793
UniProt:
A0A067L6C9
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MASKPGLAPTTYSPTPPLKSRPPIFKDSDVDWVRPDGRGFHQCRPAFFRTGAVNAAAGSA
YAEFGNTKVIVSVFGPRESKKAMMYSDVGRLNCNVSYTTFASPIRGEGSDHKEFSSVLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDIPVVISCASLALADAGIMMYDLVAGVSVSCL
GTNLIIDPILEEESCQDGSFMITCMPSRYEVTQLTVTGEWSAAKMNEAMQLCLDACSKLA
TIMRSCLKEAASSSQD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaacctggtttagctccgaccacttattctccgactccgccgctgaaatcc
cggcctcccatttttaaagattccgatgttgattgggtccgtcccgacggccgcggcttc
caccagtgtcgacccgcttttttcagaactggtgctgtgaacgctgctgcaggatcagct
tatgctgagtttggaaatacaaaggttattgtgtctgtatttgggcccagagaaagtaag
aaagcaatgatgtatagtgacgtaggccggttgaattgtaatgtgagctatacaactttt
gctagcccaatccgtggagagggatcagaccataaagaattttcttcagtacttcataaa
gctttggaaggtgcaataatgttggaaactttccccaagacaactgtagatgtttttgct
ttggtgttggaatctggtggcagtgatattcctgttgtaatatcttgtgcaagccttgcc
ttggctgatgcagggattatgatgtatgatcttgttgcgggagtttcagtgtcctgtctt
ggtacaaacctcatcattgatccgattttggaagaggaaagctgtcaggatggaagcttt
atgattacttgtatgccttcccggtatgaggtcactcagcttactgttacaggggaatgg
tctgctgcaaagatgaatgaggcaatgcagctttgccttgatgcttgctcgaagcttgca
acaataatgagatcgtgtttgaaagaggctgcttcatcctcacaagattag
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