Jatropha curcas (Barbados nut): 105628163
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Entry
105628163 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105628163
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105628163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jcu03000
]
105628163
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628163
04121 Ubiquitin system [BR:
jcu04121
]
105628163
Enzymes [BR:
jcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105628163
Transcription factors [BR:
jcu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
105628163
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105628163
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105628163
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105628163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
105628163
NCBI-ProteinID:
XP_037495172
LinkDB
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Position
Unknown
AA seq
715 aa
AA seq
DB search
MRASNQPPAASSTSSNGPTMPKSETVNGTLGFSSAVASTNQGSTLQSDVGKRAVWNEDNQ
MINGKGKPDPLKSVKQNVVDFRANASEKPATIDETTATLSNRSSSPPASKHGEWGSSLVS
NDTNSFVCTLPSFEPEKGGTVATDMPAIKVESTVRSEPSGVTRTNNSLTDQSAIKSPGSQ
ALQQHYVDQYQEPLASPVTENNSCWSEQSDWRTDTQTQTVTNTVSEVEEDIISFDNQRLK
DPEVVSRTTYLPNSANSLHVSNHSRSHSLQINDPFGVINVNADPIFVDNRVGDRTLHHAS
SNTEISNGYPEKLISSSAGLDRNMGRSFSLPIEGEVKQMGRLQGDTTALDAGESSIISNI
LSLDLDSWDDSLTSPQNLAKLLGETDKQPSPLKMSSSWKVQNNNNNQSRFSFARQEESRN
QLVDVHPSFSVFGQMPKNVSFNQDFSERRNSYFDKLGMGNGFSSSNFEESETFTSGPSVF
SSNKPPSVSRAQISAPPGFSVPNRAPPPGFSSHERMDHIFDSISGGHLLDSSSLMRNSYQ
APPAGNISSSGDIEFMDPAILAVGKGRLQGALNNPGLDMRSNFPQQLSAFENEARLQLLM
QRSLSPHQNLRYADIGDSFSSLSDSYGISSRLVDQSQMNNLSPFMQMSLQHSRNGVMSNG
HWDGWNEVQGGNNLGVAELLRNERLGLNKFYSSGYEDSKFRMPSSGDLYNRTFEM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcttctaatcagccgccagctgctagttcaacatcttctaatggccctactatg
cctaaatcagagacagttaatggtacattaggattctcatccgcagttgcaagtacaaat
cagggttctacattgcaaagcgatgtaggtaaaagggcagtgtggaatgaggataatcaa
atgataaatggtaaaggcaaaccagatcctttgaaatctgtgaaacagaatgttgtggat
tttcgtgccaacgcatcagagaaaccagccacaattgatgaaactactgcaacattgagt
aatcggtcttccagtcctccagcatctaagcacggtgaatggggctcttctttggtgtca
aatgatacaaattcttttgtttgtacattgccatcttttgagcctgagaaagggggaact
gttgcaactgatatgccggcaataaaggttgagagtacagttagaagtgaaccatctggt
gtaactagaactaataattcacttacagatcagagtgctataaaatcacctgggagtcaa
gcattacagcaacattatgttgaccaatatcaagaacctttagcttcaccagtaactgag
aacaattcttgttggagtgaacaatctgattggagaacagatactcaaactcaaacagtt
acaaataccgtgtctgaagtagaggaggatataatatcatttgataatcaaaggcttaag
gatccggaagtagtcagccgtactacataccttccaaactctgctaattcgctccatgtt
tcaaatcattctaggtctcattctttgcaaattaatgatccttttggtgtcattaatgta
aatgctgatcctatatttgtagataatagggttggtgaccgtacacttcatcatgcctct
agcaatactgaaatatcaaatggataccctgagaaattgataagcagttctgctggtctg
gatagaaatatggggcgttccttctctctaccaattgaaggggaagtgaagcaaatgggc
aggttacagggtgatactactgcattggatgctggtgagagcagcataatttcaaatata
ttgtcactagatctcgattcctgggatgactcattaacttcacctcagaatttggctaaa
ttgttgggtgaaactgacaaacagcctagccctctcaaaatgtctagttcttggaaggtt
caaaataataataataatcagtctaggttctcctttgctagacaggaggaatcaagaaat
caattagtcgatgttcatccttcatttagtgtttttggacagatgccaaagaacgtctca
tttaaccaggacttttctgaaagaaggaattcatattttgataagcttggaatgggaaat
ggtttctcttccagtaattttgaggaatctgaaacttttacaagtggtccttcagttttc
tcttcaaataagcctccttctgtttcaagagctcaaatttctgcccctcctggtttctcc
gtgcctaacagagctccacctccaggcttttcttctcatgagaggatggaccatattttt
gattctatctcagggggtcatttgctcgactcttcttccttgatgagaaattcatatcaa
gcacctccagctggaaacattagtagcagtggagatattgaattcatggatcctgcaatt
ttggcagttggtaaagggagacttcaaggtgcacttaacaacccaggcttagacatgagg
tcaaatttcccacaacaactaagtgccttcgagaatgaggcaagacttcagctgttgatg
caaagatctctctcaccacaccagaacctgagatatgctgacattggggatagcttttct
tctctcagtgattcatatggcatttcatcaaggcttgtggatcaatcacaaatgaacaat
ttatctccattcatgcaaatgtcccttcagcattctaggaatggtgttatgtcaaatggt
cactgggatggctggaatgaagttcagggtggaaataatctgggcgtggcagaactccta
cgaaatgagagactaggattgaacaagttctactcttctgggtatgaagattccaagttt
cgtatgccaagttctggggacttgtataacagaacatttgagatgtga
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