Jatropha curcas (Barbados nut): 105628173
Help
Entry
105628173 CDS
T03922
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105628173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105628173
Enzymes [BR:
jcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105628173
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105628173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DELLA
Motif
Other DBs
NCBI-GeneID:
105628173
NCBI-ProteinID:
XP_012064930
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MHKTQPKKQDIVYTKHPYIEDVGPRKIKSIQFSLMSGHEIVKAAECQVYLGQYYDTNRKP
VQGGLLDTHMGPANKNSMCQTCGANFNDCPGHFGYLNLVLPVFNVGYMTNILDILKCICK
SCSRILFDEKQCKAHLKKMRSRNLEHLKRTDLVKKIVKKCSAMASNKAVRCMRCGDMNGM
VKKAGSALSIIHDRGKLIDGYLEECKSAISHTKEFRAPISPATYILNPARVLSLFERIPE
EDCEVLGLRDRPEKLIITNIAVPPLSIRPSVVMGETQSNENDITERLKQIIQANASLRME
LLEGRRSANKYLDSWDGLQAAVALYVNSDVRVPNNVEVGKPLSGFVQRLKGKTGRFRGNL
CGKRVEYTGRTVISPDPNLKITEVAVPIHMAKILSYPERVSNHNIEKLRQCVRNGSNKYP
GAKMVRYPDGSQKVLIGNYRKRVAEELKIGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHR
ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEI
LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILKPIELWTGKQL
FSVLLRPNANVRVYLNLTVKEKIYSKPKPGDKREKETMCPNDGFVYIRNSELISGQLGKA
TIGNGNKDGLYSILLRDYNPHAAAICMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEK
AKTISNGYQHCDKLIQEYNEGKLALKPGCDAIQTLEAEITETLNKLREQAGDVCMKELHW
RNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFMDRSLPHFPRKSKTPAAKGF
VANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKGLEDLFIDYDNKVLSA
NGSVVQFVYGDDGLDPAKMEGKGGVPLNLDRLFMKVKATCPAGEGDYLSPSDISSWVKTL
LDDYDKAFDSVCSEAFKQNLSFFLGNHVKRLETMLKLDNGVEEQNSENMEEVGGVRGNTT
NIEKLAHKIYGITKRQLEVFLKTCIVRYLWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFH
FAGVASMNITQGVPRIKEIINGAKKISTPIITTELENNTNVNAARIVKTRIEKTVLGQIA
KSIKIVMTSRSASVVVTLDMKTIQEAQLSLDANTVRESILQTPRTKLKPQNIKVLDIRKL
EVIPLGDREKVHFELHSLKNMLPSITVKGIKTVERAVIAQKKREGKASIQELPTYNMFVE
GMGLQEVMGTEGVDGRKTTSNHVMEIFKYLGIEAARKCIIDEIKNVMEGHGMSIDTRHMM
LLADLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTSDHLYTAAVHGRDDRIEGVSECII
MGIPMRLGTGILKVQQRVDPRPMLTKGLDPIMA
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgcataagacacagccgaaaaaacaagacatagtctacactaagcatccttacatcgaa
gatgtcggcccacgaaaaatcaaaagtatacaattctccttgatgtctggacatgagatt
gtaaaagctgcagaatgtcaagtgtatttgggtcaatattatgacactaatagaaagcct
gttcaaggaggtttattggacacccacatgggtcctgccaataaaaattccatgtgtcaa
acttgtggcgcaaattttaatgactgtcctgggcattttggatacttgaatcttgtcttg
ccagttttcaatgttgggtatatgaccaatattttggacattttgaagtgcatttgtaag
tcttgttctcgcatactttttgatgagaaacaatgtaaagcgcacttgaaaaaaatgaga
agccgtaatctagagcatttgaagaggactgatcttgtgaagaagatcgtaaaaaagtgt
agcgcaatggcaagcaataaagcagtgaggtgcatgagatgtggagatatgaatggtatg
gtcaagaaggcagggtctgctctaagcattattcatgatcgtggaaaattaattgatggc
tatttggaagaatgtaaatctgcaatttcacatacaaaagagtttcgggcaccaattagt
ccagctacatatatcctcaaccctgccagagttctctctctttttgaaagaattcctgag
gaggattgtgaagtgcttggtctgcgtgatagacctgagaaactcatcattacaaacatt
gctgtgccacctttatcaatccgaccttctgttgtaatgggtgaaacacagagcaatgaa
aatgacatcacagagaggttaaaacaaattatccaggctaatgctagccttcgtatggag
ttgctggaaggaaggagaagtgcaaacaaatatctggattcttgggatggtcttcaagct
gctgttgcactctatgtaaatagtgatgtacgtgttccaaataatgttgaagttggaaag
ccattgagtggctttgttcagcgcctcaaaggaaagactggtcggtttcgtgggaattta
tgtggaaagcgtgttgaatatactggcaggactgtcatatcaccagaccctaatctgaaa
attactgaggtggcagttcccatccatatggctaagattttaagttatcctgaacgtgtt
tcgaaccacaatattgagaagttgaggcagtgtgtccgtaatggctctaacaaataccca
ggtgcaaagatggttagatatccggatggttctcaaaaggttttgataggtaattacaga
aaacgtgttgctgaggaactaaaaattggttgcatagttgatcgccatttagaagatgga
gacgtcgttctttttaacagacaaccaagcttgcatcgaatgtctatcatgtgccatagg
gcaagaattatgccttggagaacattgagatttaatgagtctgtttgcaatccatataat
gctgattttgatggtgatgagatgaacatgcatgtcccacaaacagaagaggctcgaaca
gaggctcttttgctgatgggggttcaaaacaatctatgcacgccaaaaaatggagagatc
ttggtcgcttccacacaagattttctaacttcatcttttctcattacaaggaaggacact
ttttatgaccgtgctgctttttcacttatgtgctcttatatgaatgatggcatggatctt
attgatttgccaacacctgcaatactcaagccaatagagctttggactggtaaacaatta
ttcagcgtcctacttcgtccaaatgcaaatgtgagagtctacctgaatctcactgttaag
gagaagatatactccaaacctaaaccaggagataaaagagaaaaagaaacaatgtgccct
aacgatggttttgtttatattcgaaatagtgagctaatctctggacagctgggaaaggct
actataggaaatggcaacaaggatggactttactctattcttctcagagactacaatcca
catgcagctgctatttgcatgaatcggttagctaagttgagtgctagatggataggaaat
catggcttctcaattgggattgatgatgtccaaccaggaaaaaaactgattgatgaaaaa
gcaaaaacaatttcaaatggctatcaacattgtgataaactaatacaggaatacaatgaa
ggaaagcttgcacttaaaccaggttgtgatgccattcagacattggaagctgaaataact
gaaacattaaacaagcttcgagaacaagctggtgatgtatgcatgaaagaattacattgg
agaaacagtccattgatcatgtcacagtgtggatcaaaaggttcccctatcaatatcagc
cagatgattgcatgtgttggtcagcaatcagttgggggtcgtcgtgcgccagatggattc
atggatcgaagccttcctcatttccctagaaaatccaaaacccctgcagccaaaggcttt
gttgctaattcattctatagtggtttgacggcaactgagtttttcttccatacaatgggt
ggcagagaaggtcttgtggacactgcggtcaaaacagctgacacagggtacatgtctcgt
cgactcataaagggtttggaggacttgtttattgattatgataataaagtactaagtgca
aatggatctgtagttcaatttgtttatggagatgatggcttggatcctgcaaaaatggaa
ggaaaaggcggagttcctttgaatcttgatcgcttgttcatgaaagttaaggccacctgt
cctgctggagaaggggactacttatctccttcagatatctccagctgggtgaaaactttg
ctggatgattatgacaaggcttttgatagcgtttgttctgaagccttcaaacagaacctc
agtttcttcctgggaaatcatgttaagagattggaaacgatgttgaaattggacaatggt
gttgaggagcaaaattctgaaaatatggaagaagttggaggcgtaagaggaaatactact
aatatagagaaactggcacataaaatatatggtattaccaaaagacagttggaggtcttt
ctgaaaacctgcattgttcgttatctttggaaaagaattgaacctggtacagcaattggt
gcaattggggctcaaagtataggggagccagggacacaaatgacattgaagacctttcac
tttgctggagttgcaagcatgaatatcacacaaggagttcctcgcatcaaagaaataata
aatggggccaaaaagatcagtacacctatcattactactgagcttgagaataatactaat
gtgaatgctgccagaattgtgaaaactcgtattgaaaaaactgttttaggccagattgct
aagagtatcaaaattgtaatgacttcaagatcagcatctgtagtggttacacttgacatg
aaaacaattcaagaggcgcaattatctctggatgctaacactgtgagggaatccatttta
cagactccaagaactaaactaaagccacagaatatcaaggtattggatattagaaagttg
gaagttattcccctgggtgatagagaaaaagttcattttgagctccattctcttaaaaat
atgcttccatcaattacagtaaagggcataaaaactgttgaacgtgctgttattgcccaa
aaaaagcgtgagggtaaagcaagtattcaagagctcccaacctacaacatgtttgtagaa
ggcatgggtcttcaagaagttatgggaactgaaggagtggatggacgcaaaacaacaagt
aatcatgtaatggaaatttttaagtatcttggaattgaggctgccagaaagtgcatcatt
gatgagataaaaaatgtcatggaaggtcatggcatgagcattgacacacgtcacatgatg
cttttagcagatctaatgacatttaagggtgaagttcttggaatcacaagatttggtatt
caaaagatggacaagagtgtattgatgttggcttcatttgaaaaaacatcggatcatctg
tatactgcagctgtacacgggagagatgacaggattgagggagttagtgaatgcatcata
atgggcatcccgatgcggctaggcactggaatactcaaagtacaacaaagggttgatcca
cggccaatgctgacaaaaggattagatcctatcatggcttaa
DBGET
integrated database retrieval system
