KEGG   Jatropha curcas (Barbados nut): 105628230
Entry
105628230         CDS       T03922                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03013  Nucleocytoplasmic transport
jcu03015  mRNA surveillance pathway
jcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105628230
  09122 Translation
   03013 Nucleocytoplasmic transport
    105628230
   03015 mRNA surveillance pathway
    105628230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105628230
   03041 Spliceosome [BR:jcu03041]
    105628230
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105628230
    TREX complex
     105628230
Spliceosome [BR:jcu03041]
 Complex C
  Other components
   EJC/TREX
    105628230
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105628230
SSDB
Motif
Pfam: FoP_duplication
Other DBs
NCBI-GeneID: 105628230
NCBI-ProteinID: XP_037494554
LinkDB
Position
Unknown
AA seq 234 aa
MSLDDINQEAIRALDRLLTTWQHDMFNGSRVWDTTDKEAGLAIETGTKLYIFLIRLASQN
EDIKYFEENQDADNSYWFVLNPELFLLGIVSESLGTAEVVLLSTNRCLAAVKRYNVPNLM
GRPMKIEICGNIGYFAASFSWGKERGGAVGRQRGGSGGGRGFWKRSWSGRGGRGRGRGEK
VSAEXSDADLEKYISELMQTKLNAFLLFLGWTFNPLFWLFSYANGGSTTPTAVL
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtcccttgacgatattaatcaagaagcaataagagccctggatcggctcctgacgacg
tggcagcacgatatgtttaacggatcaagggtatgggatacgacggacaaggaggccggg
ctcgctattgagactgggacgaagctttacatcttcttaattagattggcgtctcaaaac
gaggatattaagtattttgaagagaaccaagatgctgataattcatattggtttgtttta
aatcctgaattattcttactcggaattgtttctgaaagtttgggtacggcagaagttgtt
cttctctcgacgaacagatgccttgctgctgtgaagagatacaatgttcccaacttgatg
ggaagaccaatgaagatagagatttgtggaaatattggctactttgctgcatccttcagc
tggggcaaggaaagaggtggtgcagtggggcggcaacgtggtggcagtggcggtggccgt
ggattttggaagaggtcgtggagtgggaggggcgggcgggggcggggccgtggtgaaaag
gtatccgcagaatgatctgatgctgatctggagaaatacatttctgagctaatgcagacc
aaattaaatgcttttcttttgtttcttggttggacgttcaaccctctattttggcttttt
tcatatgctaatggtggttcaacaaccccaactgctgttctgtaa

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