KEGG   Jatropha curcas (Barbados nut): 105628400
Entry
105628400         CDS       T03922                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03013  Nucleocytoplasmic transport
jcu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105628400
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105628400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105628400
   04131 Membrane trafficking [BR:jcu04131]
    105628400
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105628400
Membrane trafficking [BR:jcu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    105628400
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    105628400
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    105628400
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_RIG_2nd WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 Beta-prop_WDR41 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 105628400
NCBI-ProteinID: XP_012065190
UniProt: A0A067LI06
LinkDB
Position
Unknown
AA seq 301 aa
MPSQKIETGHQDTVHDVAMDYYGKRIATASSDHSIKIIGVSNNTSQHLAQLTGHQGPVWQ
VAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHEIGLCLA
CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGLLDPVQKLCS
GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
IVGKEGDQWEGKVLHDFKAPVWRVSWSLTGNILAVADGHNNVTLWKEAVDGEWQQVTTVD
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccctctcaaaagatagagacaggtcatcaggacacggtccacgatgtggccatggat
tactatggcaagcgcattgctactgcctcatcagatcattcaatcaagataattggggtt
agcaataatacgtcccagcatcttgctcagctgactggtcatcaaggacctgtttggcaa
gtagcctgggctcacccaaagtttgggtccttgcttgcgtcgtgttcttacgatgggcgc
gtcatagtatggaaggagggaaatcagaatgagtggactcaagctcatgtttttgatgac
cacaaatcgtcagtcaattctattgcttgggcacctcatgagattggtctttgtttggca
tgtggctcttcagatggaaatatatcagtttttactgcacgagcagatggtggttgggac
acatccaggattgatcaagctcacccagttggtgtaacttcagtctcttgggcaccatcc
accgcacctggtgctcttgttggttctggtttgcttgaccctgttcagaagctttgctct
ggtggttgtgacaatactgtaaaagtgtggaagctctataatgggatctggaagatggac
tgctttcctgctcttcaaatgcatactgattgggtaagagatgtggcatgggcacccaac
ttgggcctcccaaagtcgactattgctagtgcttctcaggatggaaaggttattatatgg
atagtcgggaaggaaggggatcaatgggagggcaaggtcttacatgatttcaaggctcct
gtttggagagtctcatggtcactcactggtaacatattggctgttgctgatgggcataac
aatgtgacactgtggaaagaagctgtagatggagaatggcaacaggtgactaccgtcgat
ccctag

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