Jatropha curcas (Barbados nut): 105628571
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Entry
105628571 CDS
T03922
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X3
KO
K08739
DNA mismatch repair protein MLH3
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105628571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105628571
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105628571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105628571
NCBI-ProteinID:
XP_012065405
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MGSIKPLPESVRNSLRSGIILFDLTRVVEELVFNSLDAGATKVSVYVGIGTCYVKVVDDG
CGISRDGLVLLGERYVTSKLHHLADMDSANESFGFRGEALASISDVSLLEIVTKARGMPN
GYRKVLKGSRCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKCMQSSLKKVLNSVKKCVLR
IALVRPKVAFKVVDTENEDELLCTRPSSALSLLMSGFGIEDSCFFHELDVSNGVLKLSGY
ISGPCDSLTFKAFQYVYINSRFVCKGPIHKLLTHLATRFERLDSWKANSMSEKGKKCKPQ
ACPAYILNLSCPSALYDLSFEPSKTHAEFKDWMHILDFVENSIQQLWREKMIYAESFATG
TLRKDKIWKEDVSENFEFAVNKCEIQKHKSSHHHASSHFKIPAKEVGHIYSRGSDKVPFQ
GFCMNISEFKEQETDTEFLCHSDYTLQSWNGYLSKHASTINQKSDNHLWTSDDNFLSSGD
YFLEDRFTARQRSSDYEQGDTLGLEWQSESPKITSVEIKEFSGGPFSLDYHKFGDELEVS
KNNEKPFLKSCSSQRSMPLDRSLFKSEEGLEFPINDFKTKRRRVCFDEKVHILKIDARDH
RFDIIPGAMQQHEATCSQKFPVLSMGVDMPAGFDSLSRACEKSFSFHGKLCAEEKGLGSD
SFVPFDSSVSCYQSGNSEWHSLTTDALFKKTSSAVEHSSDDNSYEWRARLGKRESCWHFA
DGEETEESCSYKMASNRSNEDNFISKHASTMSDVKDHSATPIDFSKPLQGYNLNDELSLE
HSDVSVCETEWLQLDLYSGGLKSDDKYENQENQLRCRDWKQGKFPKERCRRSRSAPPFYR
NKKRFISLSHHSTMKEGNAQLFHDGLTSSETDDLEHLKFQPNYVANSLFCTRSYLKNGQD
TVLEMKESKANENCIHSQSLWSHDSPVEGLIPKQIQCSTDYGTKWRNGSQQVACNNTSSN
VDNQRNILDISSGFLHLAGNSLVPESFHKNFLEDAKVLQQVDKKFIPIMAGGTLAVIDQH
AADERIRLEELRQKVISGEGRTIAYLDAEKELILPEIGYQLLHSYGEQIRDWGWICNIEG
QGSGSFKKNLNILHQRPTMVTLLAVPCILGVNLSDGDLLEFLQQLADTDGSSTMPPSVIR
VLNFKACRGAIMFGDSLLPSECALIVEELKKTSLSLQCAHGRPTTVPLVNLVELHKQIAK
IAALDDSSSESWHGLHRQELSLERAAQRLSTARG
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggggagtatcaagcctttgcccgagtctgttcgtaattcgttacgttctgggattata
ttgtttgatttgacgcgagttgtcgaggaactggtttttaatagcttggatgctggtgct
acaaaagtgtctgtctatgtgggtattggaacttgctatgtaaaagtggtggatgatgga
tgtggcatctctcgggatggattggtcttgttgggagaaagatatgtgacatcaaagctt
catcatctggctgatatggattctgctaacgagagctttggtttccgaggagaagcattg
gcttctatttctgatgtctctttgttagaaattgttacaaaagctcgtgggatgccaaat
ggatatcgtaaggtcctaaagggatcaaggtgtttgtatcttggagtcaatgatgatagg
aaagatgttggcacaacagttgttgttcgtgatttattttacaaccaacctgttcgaaga
aagtgtatgcaatcaagtctcaagaaggttttgaactctgtcaaaaaatgtgtgcttcgt
attgcgcttgtgcgtccaaaggttgccttcaaagttgttgacactgaaaatgaagatgag
cttctttgcacacgtccttcttctgcattgtcactattgatgagtggctttgggattgag
gattcttgcttctttcatgaattggatgttagcaatggggtcttaaagctttcgggatat
atatctggtccatgtgatagtttaaccttcaaggcttttcaatatgtttatatcaactca
cggtttgtctgcaaaggtccaatacacaaattgctaactcacttggccactagatttgag
cgtctggactcttggaaagctaatagcatgtctgaaaaaggaaagaagtgtaagcctcaa
gcatgtccagcctatattctaaatttaagttgcccttcagctctctatgatttatctttt
gagccttcaaagacacatgctgagttcaaggattggatgcatatacttgattttgtcgag
aactccattcaacaactatggagggaaaaaatgatctatgcagaatcctttgcaactggt
acattgaggaaagacaaaatctggaaggaagatgtttcagagaattttgaatttgcagta
aataagtgtgagattcaaaaacataagtcctctcatcaccatgcttcctcccatttcaag
ataccagccaaagaggttggccatatttatagcagggggagtgacaaagttccatttcaa
gggttttgcatgaatatttctgaattcaaagaacaagaaactgatacagaatttttgtgt
catagtgactacactttgcaatcatggaatggctacctttctaagcatgcatccacgata
aaccagaagagtgacaatcatctatggacatctgatgacaactttttgtcatcaggtgat
tatttcctggaagatagattcacagctagacaaagatctagtgattatgagcagggcgat
accttgggcttagagtggcagagtgaatcccctaaaataacatctgttgaaataaaagaa
ttttctgggggtccattttctttagattatcacaaatttggtgatgaattagaggttagc
aagaacaatgaaaaaccttttttaaagagttgctcctcacaaagaagcatgccacttgat
aggtctttgtttaaaagtgaggaaggtcttgaatttccaattaatgacttcaagaccaaa
agaagacgggtttgctttgatgagaaggttcacattctaaagattgacgccagggaccac
agatttgatatcattccaggggccatgcagcagcatgaggcaacatgctctcagaagttt
cctgtacttagcatgggagttgacatgcctgcaggttttgatagtctgtctagagcttgt
gagaagtcattttcattccatggaaagctttgtgctgaagagaagggtcttggttcagat
tcatttgtaccatttgatagctctgtttcatgctaccagtctggaaattctgaatggcat
tctctcactacagatgcattatttaaaaagacatcttctgccgtggagcattcttcagat
gacaattcttatgaatggagagcaaggttgggtaaaagagaaagttgttggcattttgcg
gatggtgaagaaacagaggaaagctgtagttataaaatggcatcaaacagatctaatgaa
gataatttcatctcaaagcatgcaagcactatgtcagatgttaaggatcattctgcaact
cctatagatttcagcaaacccctccaaggatacaatttaaatgatgaattatctttagaa
cattctgatgtatcagtttgtgagacagagtggttacagttagatttgtattctggaggt
ctcaaaagtgatgacaagtatgaaaaccaagaaaatcaacttagatgtcgagattggaaa
caaggtaaatttcctaaagaaaggtgcagaagaagtcgatcagctccaccattttacaga
aacaagaagaggtttatttctttgagccatcattctacgatgaaagagggaaatgctcag
ttgttccatgatggccttacttcttcagaaactgatgacttggagcatctaaagtttcag
ccaaattatgtagcgaattcattgttttgcactaggtcctatttgaagaatggacaagac
actgtgctggaaatgaaggagagcaaagcaaatgaaaattgcatacactcccaatctctt
tggtctcatgattctccagttgaaggtcttattccaaagcaaattcagtgctcaactgat
tatgggaccaaatggcggaatggtagtcagcaagttgcatgcaacaacacatcaagcaat
gttgacaatcagcgtaacatccttgatatctcttctggattcttgcaccttgctggcaat
tcactagtaccagaatctttccataagaatttcctagaggatgccaaagttcttcagcag
gtggacaagaaattcatcccaatcatggctggtgggacacttgctgttatagaccagcat
gctgctgatgaaaggattcgactggaagagcttcgtcaaaaggtaatatctggggaggga
aggacaattgcctatttggatgctgaaaaagagctgatccttccagagatagggtatcag
ctacttcacagttatggtgaacaaataagagattggggatggatctgcaacattgaagga
caaggttctggcagctttaagaagaatctgaatattcttcaccagcgaccaactatggtc
actcttcttgcggtaccctgcattttaggtgtcaatttatccgatggtgacctgttagaa
tttcttcagcagcttgctgatacagatggctcttctacaatgcctccatctgttattcgt
gtcctaaattttaaagcatgcaggggtgcaatcatgtttggagattctttgctaccatca
gaatgtgcacttattgttgaggagctaaaaaagacttcactttctctgcaatgtgctcac
gggagaccaacaactgttccccttgtcaacttggtggaacttcataagcagatagctaaa
attgcagcgttggatgatagttcaagtgagtcgtggcatgggctacaccgtcaggaacta
agtttagaacgagcggcacagcgtttaagcacagctagaggttag
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