Jatropha curcas (Barbados nut): 105628779
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Entry
105628779 CDS
T03922
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105628779
03015 mRNA surveillance pathway
105628779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628779
03041 Spliceosome [BR:
jcu03041
]
105628779
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105628779
Spliceosome [BR:
jcu03041
]
Complex C
Other components
EJC/TREX
105628779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
105628779
NCBI-ProteinID:
XP_020532880
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MGSTSAIEKTEEELQREIDELHRQQRQITERLRDPRGLRRGGLAAGGGGPRNFAGNGVRQ
RGFVRPADRDHTDDQPPAKRRLLSAVVKVEDGEIVEDTEVATDLNKKKQSAEEENVGAGI
DNQSADGKLSNLQQIGWSRRDGNQRLGKRETELPVVEPLPRVLPKNEDPSLVSRNKRMLG
QLLGTLEKFRKEDMKLSGTEAFKQRSSALQRAEQRAREESERLRQQEREQIAEKRRRDLT
LRARIAAKTEEKKLELLFRRWSEHHKKLTNFIRTKAEPPIYYLPNKPLDEDATLREQQKE
QIFAEWKTTRREELSEYQKQIAEQYLGNVEKELERWQNARKARRPNNDANLQETMDKELD
THRLEHGPKTRKIPGGNNEDEDDVEDINVAEDDMMDDVLEVDENGRRGDEAAKPEADSTS
PNPENLDQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcacctccgctattgagaaaaccgaggaagagcttcaacgagagatcgatgag
cttcatcgccagcagcgccagattacagagcggcttcgtgatcctcggggactccgacga
ggagggttggctgctggtggtggtggtcctagaaatttcgccggcaatggagttcgtcag
cgaggcttcgttcgaccagctgatagagatcatacagacgatcaaccacctgcaaaacgg
cggcttttgtctgctgttgtcaaggtggaggatggagagattgttgaggatactgaagtg
gcaacggacttgaacaagaaaaagcagtcagctgaggaggaaaatgtcggggctgggata
gataatcagagtgctgatggaaagctgtccaatttacagcagatcggttggtccaggagg
gatggcaatcagagattagggaagagggagactgaacttccagttgttgagcctctgcct
agggtgttgccaaagaatgaggatccaagcttggttagcagaaataaaagaatgttaggg
caacttttaggtactttagagaaattcaggaaagaagatatgaaactttcaggtacagag
gcattcaaacaaaggtcaagtgctttgcaaagagctgagcaacgagcacgagaagaaagt
gaaaggctgaggcagcaagagcgtgaacaaattgcagaaaagagaaggagagatctgaca
ctcagagcacgtattgctgccaaaacagaagaaaagaagttggaattgctgtttcgtcgg
tggagtgagcaccataaaaaacttacaaattttataaggactaaggcagagcctccaatt
tattatttgcctaacaaaccattggatgaagatgcaacattgcgtgagcagcagaaagaa
cagatatttgcggaatggaagaccactaggagagaggaactgtctgaatatcagaagcag
attgcagaacagtatcttggcaatgttgaaaaggaattggaaaggtggcaaaacgcacgg
aaagcaaggagaccaaacaatgatgcgaatttacaagaaacgatggacaaagaattggac
acccataggcttgagcatggtccgaagacaagaaagattcctggtggaaacaatgaagat
gaggatgatgtggaggatatcaatgtcgcggaagatgacatgatggatgatgtgctagag
gttgatgaaaatggcagaaggggcgacgaagcagccaagccagaagctgatagcaccagc
ccgaatcctgagaaccttgatcagtaa
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