Jatropha curcas (Barbados nut): 105628902
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Entry
105628902 CDS
T03922
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105628902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628902
03036 Chromosome and associated proteins [BR:
jcu03036
]
105628902
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105628902
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105628902
COMPASS/SET1 complex (yeast)
105628902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105628902
NCBI-ProteinID:
XP_037495383
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MMVGTQSEREEKVSLELTEEILQSMEIGMVFRDYNGRISSMDFHKTSSYLVTASDDESIR
LYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFKG
HHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAIA
FGGYIRMFDSRKYEKGPFDIFSVGGDVSDAHVVKFSNDGRLMLLTTMDGHIHVLDSFRGT
LLSTYNVKPVSTNSTLEASFSPEGMFVASGSGDGRVHAWSVRSGKEVVSWMTYETEPHVI
KWAPGSLMFATGSSELSFWIPDLSKLAAYVGRK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatggttgggactcagtcggaaagagaagaaaaagtatcgttagaactcaccgaagag
attcttcaaagcatggaaattggcatggtttttagggattataacggtagaatcagctct
atggattttcacaagacatcaagttatctagtaactgctagtgacgatgaatctattcgc
ctttatgatgttgccagtgcaacatgtttaaaaactatcaatagcaaaaagtatggagtt
gatctggtttgctttacttctcatcctacaactgttatatactcctcaaaaaatggatgg
gatgaatctctgcggcttctctcgttaaatgataacaaatacttgcggtattttaaaggt
catcatgacagggttgtctcgctaagtttgtgttctcggaaagaatgttttatctctggt
tctcttgaccggactgttctactatgggatcaacgagctgaaaagtgtcagggtctttta
cgagtacaaggaaggcctgccacagcatatgatgatcaagggttggtatttgcaattgcc
tttggaggatacataagaatgtttgactctcgcaagtatgaaaagggaccttttgatatc
ttttctgttgggggagatgtatctgatgcacatgttgtaaagtttagcaatgatgggaga
cttatgctcctgacaactatggatgggcatattcatgtgcttgattcattccgtggcaca
cttttatcaacatacaatgtgaagccagtctccaccaactctacattagaggcatctttc
agtcccgagggaatgtttgttgcatcaggctcaggtgatggtcgagtccatgcttggagt
gtaaggagtgggaaagaagttgtgagttggatgacctatgaaactgagcctcatgtaata
aaatgggcccctggaagtcttatgtttgcaactggttcttctgagctatcattttggatt
ccagacttgtctaaattggcagcttatgttggaaggaagtag
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