Jatropha curcas (Barbados nut): 105628920
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Entry
105628920 CDS
T03922
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
jcu03015
mRNA surveillance pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105628920
09122 Translation
03013 Nucleocytoplasmic transport
105628920
03015 mRNA surveillance pathway
105628920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628920
03041 Spliceosome [BR:
jcu03041
]
105628920
03009 Ribosome biogenesis [BR:
jcu03009
]
105628920
03012 Translation factors [BR:
jcu03012
]
105628920
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105628920
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105628920
mRNA cycle factors
Stress granule specific factors
105628920
Spliceosome [BR:
jcu03041
]
Complex C
Other components
EJC/TREX
105628920
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
Helicases
105628920
Translation factors [BR:
jcu03012
]
Eukaryotic type
Initiation factors
eIF-4
105628920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105628920
NCBI-ProteinID:
XP_012065797
UniProt:
A0A067L4G5
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MAAAVTSVVPAGRSARRAAAEDDKLVFETTEGIEPIASFDEMGIKNDLLRGIYAYGFEKP
SAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQLVDTSSREVQALILSPTRELAAQ
TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAI
RLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVKILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN
FTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctgtgactagcgtggttccggcggggcgaagtgcaagaagagccgctgca
gaggatgataagttggtgttcgagacaacggaggggatagaaccgattgcaagctttgac
gagatgggtattaagaacgatctgttgcgagggatctacgcttatgggtttgagaagcca
tcggcaattcaacaaagggctgttatgcctataattaaaggtcgagatgttattgctcaa
gcgcaatctggtactggaaagacctctatgattgctctcacggtttgtcaacttgttgat
acctcaagcagagaggtgcaggcattgatattgtctccaaccagggaattggcggctcag
actgaaaaagtaatattggcaattggtgattacattaatatacaagcacatgcctgcatt
ggaggcaaaagtgtgggcgaggatatcagaaagttagaatatggagttcatgttgtgtct
ggtactccagggagagtatgtgatatgataaagaggaggactttacgaactagagccatt
cgattattagttcttgatgaatctgatgagatgctgagtagagggttcaaggatcaaatt
tatgatgtgtacagatatcttcctccagagcttcaggttgtgttgatttctgctaccctt
cctaatgaaattttggagatgacaagcaagttcatgacagatccggtaaagattcttgtg
aaacgtgatgaattgactttggagggcatcaagcaattttttgtagctgttgaaagggaa
gagtggaaatttgatactttgtgtgacctctatgatactcttaccattacccaagctgtt
attttctgcaacacaaagcggaaggtggattggttaacagagaaaatgcggagtaataat
tttacagtctcatcaatgcatggtgacatgcctcagaaggagagagatgcaattatggga
gagttccggtccggtactacccgtgttctgatcaccactgatgtttgggcacgtgggctt
gatgttcaacaggtttctttggtgatcaattatgacttaccaaacaatcgagagctgtac
attcatcggattggtcgttcgggtcgatttgggcggaagggtgttgcaataaacttcgtc
aaaagtgatgatatcaagattttacgagatatagaacaatattatagtacccagatcgac
gaaatgccaatgaatgttgctgatctgatctag
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integrated database retrieval system
