Jatropha curcas (Barbados nut): 105628974
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Entry
105628974 CDS
T03922
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105628974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105628974
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105628974
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105628974
RNA polymerase I system
105628974
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105628974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
105628974
NCBI-ProteinID:
XP_012065876
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN
GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYIPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcaccggcacaaattccgactagctttggtcatgagctgagagcttgtctt
cgttgccggctcgttaaaacctacgatcagtttagagagtctggatgcgagaattgccca
ttctttaaaatggatgaagatcatgagcgtgtcgtcgactgcactacccctaacttcaat
ggaataatttctgtaatggacccaagtagaagctgggctgctcgctggctgagaattgga
agattcgttcccggttgttacactcttgctgtctcagaggcactgccagaagacttgcag
aatttatgtgaagatgaacgtgtgcaatacattccaccaaaacgtgtgtga
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integrated database retrieval system
