Jatropha curcas (Barbados nut): 105629175
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Entry
105629175 CDS
T03922
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105629175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105629175
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
RNases
105629175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
105629175
NCBI-ProteinID:
XP_012066103
UniProt:
A0A067LG00
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MPSSKDESEEPISPNEEKSIDDSNNNSSNFYDIYGPQAKAELVFKMPEANSTLNMEDVQG
LVTWVLAEGFMPTWVFIKNKPLIPKVAMLFIPGLDAALYLSKSKLLCSFKECCGNPRALL
ALSCMSDEMQTIDALLTCKTKRKRDAVDSVSRKSTQTSEQEGRNSGMRDLPSAELMKDLP
FPLTYYTLAAKQMEENGYCINQPGFLSTNPAPPGSAPYDMLALDCEMCITNEGFELTRVT
LVDVKGQVVLDKLVKPLNDIVDYNTRFSGITREMLTGVTTSLKDVQEEFLKLVYKETILI
GHSLENDLIALKISHELVIDTALLYKHPRGGSYKTALRILAKKFLSREIQQSGAGHDSIE
DARAALELALLKIKNGPDFGSPASFLRRKLLTVLSESGKISSVIDDISVVKRYASESSHA
FPVSSDDEALSKAMKEVKNDRVHFIWTQFSELNSYFKKQVEDEEKLNAKLAEMISLLTCK
KKSAKKNGIKCCMTSDLKEILTNMDNRVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLL
AEKKETTQCREKIVKVLEELQAQAEVALCFVGLKN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttcaaaagatgagagcgaagaacctatatctcccaacgaagagaaatcgatt
gatgatagtaacaacaatagcagcaatttctatgatatctatggaccgcaagcaaaagca
gaacttgttttcaagatgccagaagctaactcaactttgaatatggaagacgttcaagga
cttgtaacctgggttctcgctgaaggattcatgccaacatgggtttttattaagaataag
cctttgattccaaaagtggctatgcttttcatacctggcctggatgcggcattatactta
tcaaagtctaagttactttgtagttttaaagaatgttgtggcaatccaagggcactttta
gctcttagctgtatgtcagatgaaatgcagacaattgatgcacttctaacttgcaagaca
aaaagaaagagagatgcagttgattcagtttcaaggaaatctacccagacatctgaacaa
gaaggaagaaattctggtatgagggacttaccatcagcagaactcatgaaagatctacct
ttcccgctgacatactacacacttgcagctaaacaaatggaagaaaatgggtattgtatc
aatcaaccaggttttctgtctaccaatcctgcacctccaggttctgctccttatgatatg
ctggcacttgattgtgaaatgtgtatcacaaatgagggctttgagctgacaagagtgacc
ttggtggatgttaaaggacaggtggtattagataaattggttaaaccattaaatgatatt
gtcgactataacacgcggtttagtggaatcacacgtgagatgctgactggggtaacgaca
agtcttaaagatgttcaggaagagttcttaaagctggtttacaaagagactatcctgatt
ggccattcattggagaatgatttgatagcactaaagatctctcatgaattggtgattgat
actgcattgttatacaagcatccccgaggtggatcttacaaaactgctctcagaattctt
gctaagaaatttctttctagagagatacagcagtcaggggctggacatgacagtattgaa
gatgcaagagcagctttggaactggcattgttaaagattaaaaatggacctgattttggt
tcccctgcatcatttttaaggaggaagctcctcactgttttgagtgagagtggtaaaata
tcctctgtcattgatgatatttccgtggtgaagcgttatgcttctgaatcatcccatgca
tttcctgtgtcttccgatgatgaagcactttcaaaggcgatgaaggaggtgaagaatgat
agggtgcacttcatctggacccagttttcagagttgaactcctatttcaagaagcaagtg
gaggatgaggagaagctaaatgcaaaacttgcagagatgatatcattgcttacatgcaaa
aagaagtctgcgaagaagaatggcatcaaatgctgtatgacatctgatctaaaggaaatt
ttgactaacatggataacagggtccgttgcttatactctgccttgccaactaatacaatg
cttataatttgcaccggacatggagatactgcaattgttagaagattgaggaaattgctc
gcggagaagaaagaaaccacacaatgccgtgagaagattgtaaaagtcttggaagagctt
caagcccaagctgaagtagctttgtgttttgtaggtttgaagaactga
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