Jatropha curcas (Barbados nut): 105629180
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Entry
105629180 CDS
T03922
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105629180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105629180
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105629180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
105629180
NCBI-ProteinID:
XP_012066111
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MKMVGEAKLRSEDLNQCFERLMTVGSGNSGIDSGISQGGVKMEGIVITEWKDIPMELLLR
IVSLVDDRTIIMASGVCSGWRDAICLGLTHLCLSWCKNNMNNLVLSLAPKFTKLETLVLR
QDKPQLEDNSVEAIASYCHDLQDLDLSKSFKLSDRSLYALAHGCPNLTKLNISGCTSFSD
AALEYLTGFCQKLKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLA
YGCPDLRTLDLCGCVCITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRMKNKP
AMWKSMKERCDEEGLKSLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTS
VHCACAVQAHRTLSYIPNHAH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggtgggagaagcaaaactgaggagtgaggacttgaaccagtgctttgagagg
ttgatgacggttggtagtggaaatagtgggattgatagtggtattagtcagggaggagtt
aaaatggaaggaattgttatcactgagtggaaagatattcctatggaacttttgctgcgg
atagtttctcttgttgatgatcggaccataattatggcatctggggtttgtagtggttgg
agggatgctatctgcttgggcctcacccatctctgtctctcttggtgcaaaaacaacatg
aacaacttggttctgtcactggctcctaaattcacaaaactggaaactctggtcctgcgc
caagacaaaccacaacttgaggataattctgtcgaggctattgcaagttactgccatgat
cttcaggacctggacctaagcaaaagctttaagcttagtgatcgttctctctatgcatta
gctcatggttgtcctaacctgaccaaactgaacattagcggttgtacgtcatttagtgat
gctgctcttgaatatctgactggattttgccaaaaattaaaaattttgaatctttgtgga
tgtgtaaaggctgcaactgaccgtgctttgcaggccattgggcgaaactgcagccaattg
caatctctgaatctaggatggtgtgagaatgtgggtgatgttggagtaatgagtctagca
tatggatgccctgatctcagaactcttgatttgtgcggttgtgtctgtataacagatgat
agcgtgattgctttggcatacagatgtctccatctgagatcactcggcctgtactactgt
cgaaacataacagatagagcaatgtattctttggttcatagccgaatgaagaacaaacct
gcaatgtggaaatcaatgaaggagaggtgtgatgaagaagggttaaagagcctcaacatc
agtcagtgcacagcactcactcctccagctgtgcaggcactatgcgactcatttcctgca
cttcacacctgctcagggaggcattccctcgtcatgagtggctgtttgaacttgacatct
gtgcattgtgcctgtgcagtccaggcacaccgcacattgagttatattcccaatcatgct
cattaa
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