Jatropha curcas (Barbados nut): 105629387
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Entry
105629387 CDS
T03922
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03030
DNA replication
jcu03410
Base excision repair
jcu03420
Nucleotide excision repair
jcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105629387
03410 Base excision repair
105629387
03420 Nucleotide excision repair
105629387
03430 Mismatch repair
105629387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105629387
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105629387
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105629387
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105629387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
AAA_30
AAA_22
Rad17
AAA_19
AAA_18
BRCT_2
AAA_assoc_2
nSTAND3
RuvB_N
Zeta_toxin
AAA_24
AAA_5
AAA_16
RNA_helicase
Sigma54_activ_2
AAA_14
5_3_exonuc
AAA_17
NTPase_1
DNAX_ATPase_lid
AAA_28
TsaE
Motif
Other DBs
NCBI-GeneID:
105629387
NCBI-ProteinID:
XP_012066371
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MQPDIRKWLMKAHDKGNGNAAKPAQLATTKTEKKPPSVESKPERPAQGGEENSGRRKTSK
YFAKDKQKPKAEKEVDELPAKRKTQNDANESVKLPPLKKIHKVDDGGDDDDFVLPDKKKS
VDATPSKKLKTVSGRGVAKKAVDDDSDAEDDPKDESPLKSGGRGRGGRGGSSALAGGRGR
GSGRSGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGG
RVTGSVSKKTNYLLCDEDIEGRKSSKAKELGTPFLTEDGLFNMIRSSKAKAPALNEAKES
VKKVASQPKKSPEKAEVKCNSITKNGSRKDSTSGVSPAKQKERTNICSSLPWTEKYRPKA
PNDIIGNQSLVNQLHSWLKNWDEQFLGTGNKGKSKKQNDSGAKKAVLLSGTPGIGKTTAA
KLVSRMLGFQAIEVNASDSRGKADNKISKGIGGSNANCIKELVSNEALGVNMDRSKHPKT
VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT
KQQMAKRLMQVANAERLQVNEIALEELAERVNGDMRMALNHLQYMSLSMSVIKYDDVRQR
LLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIIQENYINYKPSSIG
KDDNGMKRMKMIARAAESIADGDIINVQIRRYQRWQLSQTGSIASSIIPAALLHGQRETL
EQGERNFNRFGGWLGRNSTMGKNLRLLEDLHVHLLASRESNYGRETLRLEYLTLLLKRLT
DPLRVLPKDEAVEKVVDFMNTYSISQEDTDTIVELSKFQGHSNPMDGIPSTVKAALTRAY
KEGNKFRMVRTADLVPLPGMKKVPKKRIAAILEPSDDGLAEENGDVLAANDEENSSDTEG
TEEAPDGEQLKSELNSLKSKGIEVEMEIKGAGNSNAKKMPTGRGRGGSSSAAKKPAGRGK
GTSGSSEKAGSKRKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagatattagaaaatggttaatgaaggcccatgacaaaggcaatggtaatgct
gcaaagcctgcacaacttgctacaacaaaaacagagaagaaacctccttcagtggagtca
aagcctgaaagacctgctcaaggaggggaagaaaattctggcagaaggaaaactagcaaa
tattttgcaaaggacaaacaaaagccaaaagcggaaaaagaagttgatgagcttccagca
aagagaaaaactcaaaatgatgctaacgaatctgtcaaactgccacctttaaagaaaatt
cacaaggttgatgatggaggagatgacgatgactttgttttgcctgataagaagaagtct
gttgatgccactcctagtaagaaattgaagactgtctctggcaggggagttgctaagaag
gctgtagatgatgattccgatgctgaagatgatcctaaggatgaatctcctcttaagtct
ggtggaagagggcgcggtggtaggggtggatcatcagcattggctggtggaaggggcaga
ggtagtggccggagtggatttatgaattttggtgaaaggaaagatcctccacacaaagga
gaaaaggaagttcctgaaggtgcacctgactgtttggctggtttgacatttgtaattagt
ggaactcttgacagtttggaaagagaagaagcagaagatttgattaaacggcatgggggt
cgtgttactggatctgtcagcaagaaaactaattatctattatgtgatgaggatatcgaa
ggacgaaaatctagcaaagccaaagagcttggaactcctttccttactgaggatggattg
tttaatatgatacggtcatctaaggcaaaggcccctgcacttaatgaggcaaaggagtct
gtcaagaaagttgcttctcagccaaaaaaaagtcctgaaaaagcagaagttaaatgcaac
tctataacaaaaaatgggagtcgcaaagattctacctctggtgtctctcctgctaagcag
aaggagcgaactaacatatgttcttcccttccgtggacagagaaatataggccaaaagct
ccaaatgatatcattgggaatcagtcattggttaaccaacttcatagttggttgaaaaat
tgggacgaacagttccttggtaccggaaataaaggaaagagcaagaaacaaaatgattct
ggtgccaaaaaagcagtgctattaagtgggacacctggtataggcaaaacaacagcagca
aagctagtcagtcgaatgcttggtttccaggcaattgaggtaaatgctagtgatagtcgg
ggaaaggctgataacaagattagcaagggaattggtggaagtaatgcaaattgtataaag
gaacttgtcagcaatgaagctttgggtgttaacatggataggtcaaagcatccaaaaaca
gtgcttatcatggatgaggtagatggtatgtctgcaggggatagaggtggagttgctgat
cttattgctagcataaagatttcgaaaattcccattatctgcatttgtaatgatcgttac
agtcagaaactaaaaagtttagtgaactactgcttacttcttagtttccggaaacctaca
aagcaacagatggcaaagaggttaatgcaagttgcaaatgcagaacgccttcaagttaat
gagattgcactcgaggaacttgcggaaagagtgaatggagacatgcgcatggcactaaac
catttacaatatatgagtctgtccatgtcagtcattaagtatgatgatgttagacagcgc
cttcttagcagtgcaaaggacgaagatatttctcccttcacagctgttgacaagcttttt
ggctttaatggcggtaaactgagaatggatgaacggattgaccttagcatgagtgatcct
gacttggtgcctcttataattcaggaaaattatatcaattataagccaagttcaattggc
aaagatgataatgggatgaaacgaatgaaaatgattgcccgcgctgctgagtctattgcc
gatggagatataataaatgtgcagattcgaagatatcaacggtggcagctctctcaaact
ggttccattgcttcctctattattccggctgcattgctgcatggacaaagggagacactt
gaacagggagaacggaattttaacaggtttggtgggtggctgggaaggaattcaaccatg
ggcaaaaatcttaggcttttggaggacttgcatgttcatctccttgcttctcgtgagtct
aattatggaagagagactcttcgacttgaatatcttacccttcttttaaaacgattgact
gatcctcttcgagtgctgcctaaggatgaagctgttgagaaggttgtggacttcatgaat
acatattcaataagtcaggaagacactgatactattgtcgagttgtcaaaatttcagggc
cactcaaatccaatggatggcatcccatctactgtcaaggcagccttgaccagagcatat
aaagaaggaaacaaatttaggatggtacgaactgcagacttagtcccacttcctggcatg
aaaaaggtccctaagaagcgaattgcagcgatcctagaaccatctgatgatggtttagct
gaggaaaatggtgatgtgttagcagcaaacgatgaagaaaactcttctgacacagagggc
acagaagaagctcctgatggtgagcaactgaagtctgaacttaatagtttgaagtcaaaa
ggaattgaagtagagatggaaataaagggagctggaaattcaaatgctaagaagatgccg
acaggcagaggaagaggtgggtcctcatctgcagcaaagaaaccagctggcagaggaaaa
gggacttctgggtcctcagagaaggcaggatctaagagaaagagatga
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