Jatropha curcas (Barbados nut): 105629479
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Entry
105629479 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105629479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105629479
03036 Chromosome and associated proteins [BR:
jcu03036
]
105629479
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105629479
Coactivators
SAGA/TFTC/STAGA complex
105629479
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105629479
STAGA complex
105629479
TFTC complex
105629479
SAGA complex
105629479
SLIK complex
105629479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
105629479
NCBI-ProteinID:
XP_012066476
UniProt:
A0A067L2R4
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MDQPTPTPSTTTTATTATASQPTDPPPPQQLPSSALPQPQQPASQQPPSSTTTPAPTTTP
ITNPNPNPSLRPSTSNSLNQPTTRPQTLHSHRQWHHPHPHSHFSHFSSIAASPSPSLPSS
SVSSLSSSASQQQRGGVAIGVPASHPTPSPAPFSSSFGQQFGALTRGTVNVPESVANASN
SQVRHGMQGMGMTGSMSSGSQIRPVGIPAHHQQRPVQSSIRPPTSSPNNQSPSAQNLQGH
GFMRPSVVTSGSPASTASQNMQSSNQPWLSGSQGKPPLPSPSYRPQISSPSVPQQRSHIP
QQHHSLPATSQQQHMSPAQPQQPLPSHQPSEHFGQHLPPSRGPRSITQQLTLQGSANLKP
SSLAVVQPNNVQPVAQSRTTNMESEESGNRILSKRSIHELVSQIDPSEKLDPEVEDILAD
IADEFVESITTFGCSLAKHRKSDTLEAKDILLHLERNWNITLPGFSGDEIKTYRKPLTSD
IHKERLGVIKKSILASEIGNVKNSGGQTTGNAKSNLTKTPANAVPTPNLKTREVT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaccaacccctactccttccaccaccaccaccgccaccacagccacagcttca
cagcctaccgacccaccaccaccacagcaactgccatcatcggcacttccacaaccacaa
caaccagcatcacaacaaccaccttcgtccaccacaactccagccccaaccacaactccc
attacaaaccctaaccctaatccttcattaagaccttcaacgtctaattctcttaaccag
ccaactacaaggccccaaaccctacatagtcatagacaatggcatcatcctcatccacat
tcacatttctcgcatttctcttcgattgctgcttctccgtctccttctcttccgtcttcg
tccgtgtcctctttatcatcctctgcttctcaacaacaaagaggcggtgttgctattggt
gttcccgcgtctcaccctaccccttctcccgctcctttctcgtcttcttttggtcagcag
tttggtgcattgactcgcggcactgtcaatgtgcctgaatctgttgctaatgctagcaat
tcacaggtgaggcatgggatgcagggaatgggaatgacaggatcaatgagttcgggttct
cagattcggccagttggtattcctgcacatcatcaacagagacctgttcaatcatctatt
agaccgccaacttcttccccaaataaccagtccccttctgctcaaaatttgcaagggcat
ggttttatgaggccttcagtagttacttctggttccccagcatcaactgcatctcaaaat
atgcagtcctctaatcagccatggttatctggatctcaaggcaagcctccattgccttca
ccttcatatagaccacaaataagctccccatctgtgccgcaacaaaggtcacatattcct
cagcaacaccattccctgcctgccacttcacagcagcagcacatgtcacctgcacagcca
cagcagcctttgccatcccatcaaccatcagaacattttgggcaacatcttccaccatca
aggggtccacggtccataacacaacagctcactcttcaaggttcagcaaacctgaagcca
tcttccttagcagtagtacagcctaacaatgtacagccagtggcccagagtcgtacaact
aatatggaaagtgaggaatctggtaatcggatacttagcaaaagaagtatccatgagcta
gttagccagattgatccatctgagaagttggatcctgaagttgaggacattcttgctgat
atagctgatgaatttgttgagtcgatcacaacatttggttgctccttagccaagcatcga
aaatctgatacattggaagcaaaggacatacttctacatcttgaaagaaattggaatata
acacttccaggatttagtggtgatgagattaaaacttaccgaaagccgcttacaagtgat
atccacaaggaacgacttggagttataaagaaatcgatcttggcatctgagataggaaat
gttaaaaactctggtggacaaactactggaaatgcaaagagtaacctgacaaagacacct
gcaaatgcagtgcccacccctaacctaaaaacccgtgaagtgacatga
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