Jatropha curcas (Barbados nut): 105630000
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Entry
105630000 CDS
T03922
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105630000
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
105630000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
105630000
NCBI-ProteinID:
XP_012067058
LinkDB
All DBs
Position
Unknown
AA seq
1977 aa
AA seq
DB search
MWTNVFRIGGLHHVSWFQFLPNESDLNPLPDKSVKLEQKDAATWLVLWSHLQLQKDGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQASVSRLRVVSSGVWVAPGD
SEEVAAALSQSLRNCIEKALGGLSYMRYGDVFSKYHPSQNEGLFRRQPTVEFVFAANEEA
IFVHVVISAKHIRALSSGDIEKVLKHSTNHSGYRLPVIVSPHGMRGWLTGCCPNDLIKQV
YFSGSGKIRTSNRFIGLPYHLSQGPGCLLRGQNCYVEVTLGCPISDTEKGLQSSSNSIRN
LTKNHVVESPVVGRGDHKGSPDQISIHEKTFIYPAEAVVVPVLQTSFARSSLKRFWLQNW
IGPSFPGSSFFMHCGGDLDSMEGSRIESNGTRIQHGYNSSSNSNSSSIGSISSSSSDSDQ
KMTTETGDLDADADSLSCRQSGLSSNDQLEIDGAKLGSKRPRSGMTEAYGQMGTMKNTSM
QDAYKSDFGSLEVNNSTITGVANEQIGSHLDWDDDDRGMGINIQALLSEFGDFDDFFEND
ALPFGEPPGTAESQALMFSAPDCGEVVSSPIGVMDVADHMLLPVGFSSFESFNPPPTTSM
DECISKSQDITLEALTSGPVNHTPLSSTGEFDHLIKAEALMSFAPEYGAVETRASESSSS
IFRSPYRPQSRKVESSNSSPNNYTYGATPPSSPCFDGSDEKTSMPMNLKSGPARQDTKKY
YTHVESGRDYRDRKFITHNGSLARSEIVSSSFSMVNSTNAIKSVQRKMAEATGSENFLLS
MKTVLATEVECLMFQASMCKVRHILSSSSNPVPTSLSRLSSSTVLSELPGDGSTMTDNIS
SRYEMKKKESIPVRIAGDIDGGVLDSHLNAPVGVWRSVAVPKVAKPSNSPSIEVGPSLPF
HSLNEERMLSYKHRQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRG
FSCGPSMVHAGCGGTLASCHSLDIAGMPLVDPLSSDINASSVISLLHSEIRTALKSAFGN
LDGPLSITDWCRGRSQSSDGGIACDGSFAESTLSECKDSSSTVCLSVGEPMSPAQSSAAV
SSCLEVSATADGAKADDTGQRRLSQEIESEQLPGSRRPTLFVLPSPALLVGYQDDWLKTS
SSSLQLWEKAPFEPYASPKPITYCVICPDIDPLTSAAADFFQQLGTVYEMCKLGTHQPQS
QGNQMEIDTGKLSSTGFVLLDCPQSMKIESSNTSLVGSISDYFLSLSNGWDLTSYLKSLS
KAIKVLKIGPSLSTNPKEGNSGPCMVIYVVCPFPEPVAVLQTVIESSVAVGSTFLTSDRE
RRPILLNHVGKALSSSAVVDEASPSNILVLSGFNVPKLVLQIVTVDAIFRVTSPGLNELV
ILKETAFTVYNKARRISKGSSNDIQSSTMSGRSHSVMPQMTSIPAMWKDCVAPRLGGPAL
PREGDIDASLRPGTWDNSWQTRTGGLNYDPNRNGDYFLQDDIRYLFEPLFILSEPGSLEN
ATAPAVFGNLTAESSKMLSDDSSGGFMQNASSAVSADTGSSSQLDGSEPDGFGGSYQKTL
PSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQ
ILQACSSPDIGAIKPRDFVITRIGNFFELEYLEWQKAIYSVGGSEMKKWPLQLRRSIPDG
MPGSSNGASLQQQEMSLMQERTLPSSPSPLYSPHSKGSGFMKGGLGQSSGRKQLIGGHTV
VDNSRGMLQWVQSISFVAISIDHSLHLVFQADSQSPAGAQGGIGVGASGYLEGFTPVKSL
GSTSASYIVIPSPSLRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLATGFVVSKAVP
SMGKDYRSNSREEWPSVLSVSLIDYYGGNSITQEKIPRGIMKQGRISSEVRDFEIEIHLI
LESISAELHALSWMTVSPAYLDRRTALPFHCDMVLRLRRLLHFADKELSSQPDKSQM
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtttttagaattggaggtcttcatcacgtatcatggttccaatttctc
cctaatgaatctgatttgaatcctctaccagataagagtgtaaagttagagcagaaagat
gctgctacatggttagtgctttggtctcatttgcagttgcagaaagatggatttctcagt
acatggacaaattcctttgtcggaccttgggatccgtctcagggtttgcacaatcctgat
gaaaaaatcaaactctggcttttccttcctgggcgtcactcttctgttgttgagactgcc
caagcttcagtgtctagattaagagttgtttcatctggagtttgggtggctcccggggac
tctgaagaagttgctgcagctctttctcagtctttaaggaattgtatagaaaaagcgctt
ggtggactatcatacatgagatatggagatgtattttcaaagtatcacccatctcaaaat
gaaggacttttcaggagacaacctacagttgaatttgtctttgctgccaatgaagaggca
atctttgtgcatgttgtaatatcagcaaagcatatccgagcactttcaagtggtgacata
gagaaagtgttaaagcattctactaaccattctggttacagacttccagtgattgtttct
cctcatggaatgcgtggctggctcacaggatgttgtccaaatgatcttatcaagcaagtg
tatttcagcggttccggaaagattaggacatcaaatagatttataggtctaccatatcac
ctttctcaagggcctggatgcttgctgagggggcaaaattgctatgttgaagtgacgctt
ggttgtcctatatctgacaccgagaaggggttgcaatcaagctcaaattcaatcaggaac
ttaactaagaatcatgttgtggaatctcctgttgtgggaagaggcgatcataagggatca
ccagatcaaatatcaatacatgagaagacatttatttatccagctgaggcagtggttgtt
ccagtcttacaaacatcatttgctagatcttctttaaaaagattttggctccaaaattgg
attgggccatcgttccccggttcatctttctttatgcattgtggcggtgatttagatagc
atggaaggatctcggattgaatcaaatggaacacgtatacagcatgggtataatagtagt
agtaatagcaatagtagcagcattggctcaataagcagcagctccagtgatagtgatcaa
aagatgaccactgaaactggtgaccttgatgcagatgcagattcattatcatgtagacaa
tctggtttatcttctaatgatcagcttgaaattgatggcgccaaattgggttctaaacgt
cctcgttcaggaatgacagaggcatatggtcaaatgggtaccatgaagaatacttctatg
caagatgcttacaagtctgattttggttctcttgaagttaacaattcaaccatcacaggt
gttgcaaatgagcagattggatctcatttagattgggatgatgatgatagaggtatgggg
attaatatccaagctcttctatctgaattcggtgattttgatgacttctttgagaatgac
gcattgccttttggagagccccctggaacagcagaatcacaggctctgatgttttcagcc
ccagattgtggagaagttgttagcagtcctattggggtaatggatgttgcagatcatatg
cttttgcctgtaggtttttcatcttttgagagttttaatccacctcccacaacatctatg
gatgagtgcatcagcaaaagtcaggatatcaccctcgaggctctgacatcaggaccagtg
aaccatacccctctgtcttctacgggtgagtttgatcatttaatcaaagctgaagctctc
atgtcctttgctccagaatatggagcagttgaaacccgtgcaagtgagtcctcatcatca
attttcagaagcccatatcgtccacagtcacgcaaagttgagagttcaaattcaagtcca
aacaattatacatacggcgcaaccccaccatcttctccttgcttcgatggatcagatgag
aagactagcatgcctatgaatctaaaatcaggtcctgcaaggcaggacacaaagaaatat
tacactcatgtagagagtgggagggattatcgtgacagaaaattcatcacacacaatggt
agccttgctagaagtgagattgtgtcttcttcattctctatggtcaattctacaaatgcc
atcaaatctgtccaaaggaaaatggctgaagctacaggatcagagaacttcctactttct
atgaagactgtattggctactgaagtcgaatgtcttatgttccaagcttctatgtgcaag
gttcgacacatactttcatcttcttctaaccctgtacctacaagcttgagtaggttaagc
agtagcactgttttgagcgaacttcctggagatggaagtaccatgacagacaatatatct
agcaggtatgagatgaagaagaaagaatctataccagttagaatagctggtgatattgat
ggaggagtgctggatagtcatctcaatgcacctgttggtgtttggcgctctgttgcagtt
cctaaagtagccaaacctagtaattcaccaagtattgaagttggtccatccttacccttc
cattcattgaatgaggaaagaatgctttcatataagcacagacaaccactgcaggagcta
ctggatggcatggcattacttgtccagcaagccacttcttttgttgatgtggctctggat
gcagattgtggggatggtccttatggctggcttgcattgcaagagcattggaggcgtgga
ttttcttgtgggccttccatggtccatgcaggctgtggggggactttggcttcttgtcat
tctctggacattgctggcatgccattagtagatccactttcttctgatattaatgcctcc
tctgtgatcagcttgcttcactctgaaatcagaacagccttaaaatctgcatttgggaat
ttggatggtccattatccatcactgattggtgcagaggccgcagccagtctagtgatgga
ggtattgcatgtgatggatcttttgccgagtctactttaagcgagtgcaaagattcttca
agcactgtatgtttatcagttggagaaccaatgagcccagctcagtcttctgctgctgta
tcttcttgccttgaagtgtctgctacagcggacggagctaaagcggatgacactggccaa
agaagattgagccaagaaattgagtcagagcagctaccaggttcccgaaggccaacactt
tttgttcttccctcccctgctttacttgtcgggtatcaggatgattggcttaagacatca
tctagctctttacaactctgggaaaaggcaccttttgaaccatatgcttcaccaaaacct
attacttattgtgttatatgcccggacattgatccccttacttctgctgcagctgatttt
ttccaacaacttggaactgtttacgagatgtgtaaattgggaactcatcaacctcagagt
cagggaaaccaaatggagatagacacggggaaattgtcttccactggttttgtgctgcta
gattgtcctcagtcaatgaagatagaaagcagcaatacatctcttgtgggttcaattagt
gattattttctctctctctctaatggctgggacttgacaagctatcttaagtctctttca
aaggcaattaaagttttgaaaattggtccgagcttatcaacaaacccaaaagaaggaaat
agtggtccttgtatggttatctatgtggtgtgcccctttcccgaacctgttgcagttcta
caaactgttattgaatcttctgttgctgttggatcaacatttctcacatcagatagagag
aggagaccgattttgctgaatcatgttggcaaggctctaagttcctcagcagtggtggat
gaagcatcaccctcgaatattctagtactttcagggtttaatgttcctaaattggtattg
caaattgttacagttgatgctatttttagggttacaagtcctggtctcaatgaacttgtt
attcttaaagagactgctttcactgtatacaacaaggctcgtcgaatttcaaaaggttcc
tcaaatgatattcagtcatcaacaatgtctggtagatctcattctgtcatgccacaaatg
acttctattccagcaatgtggaaggattgtgttgctcctcgacttggaggacctgcactt
ccaagagaaggtgatattgatgctagcttgagaccaggtacctgggataactcctggcag
acaaggactggaggattaaactatgatccaaacagaaatggagattattttcttcaggat
gatattcgctacttgtttgagccactttttattctttcagaaccaggatctctggaaaat
gcaactgcccctgctgtttttggcaatttaactgctgaatcttcaaagatgttatctgat
gatagtagtggaggcttcatgcaaaatgctagctcagctgtgagtgcagatactggatca
agttctcaacttgatggatcggagccagatggctttggaggtagctatcaaaagactctt
ccaagtctacactgttgctatggatggactgaggactggcgctggctagtgtgcatctgg
acagatgcaagaggagaattacttgacagccatatattcccttttggtggaattagcagt
cggcaggacacaaagggcttgcaatgcctctttgtgcaagttctccagcaaggttgtcag
atacttcaggcttgctcctctcctgatattggtgccataaagcctagagatttcgtgatt
acacgcattgggaatttctttgagcttgagtacctagaatggcagaaagcaatttattca
gttgggggttctgagatgaaaaaatggcccttgcaacttcggcgatctatacctgatggg
atgcctggaagtagtaacggggcttccttgcagcaacaggagatgagtttaatgcaagag
agaactcttccttcgtcacctagtccattgtacagtcctcactcaaaaggttctggcttt
atgaagggtggtttgggacaatcttctgggagaaaacagctcataggtggacacactgtg
gttgacaactcgaggggaatgcttcagtgggtgcagagcatcagttttgttgcaatttca
attgaccattctttacatctggtttttcaagcagattcacaatctcctgctggagctcag
ggtggcattggtgttggagcatctggttatctggaaggttttactcctgtaaagtctctt
ggttctacatctgcatcttacattgtaattccatcacccagcttgcgctttctccctcca
acccctcttcagctaccgacttgtcttactgccgaatcacctccgcttgcacatctactt
catagtaaaggctctgcaattccccttgcaactggctttgtggtttctaaagctgtgcct
tctatggggaaagactacaggagcaactcaagggaagaatggccttctgttctttctgtg
agtcttatcgattattatgggggtaatagtattacccaagaaaaaattcctagggggatt
atgaagcaaggaagaataagttcggaagttagagactttgaaattgagatacacttgatt
ctcgagtccatatcggcagagcttcatgctttgtcatggatgactgtgagcccagcatat
ttggatagacggactgcactgccgtttcattgtgacatggttttaaggcttagaaggctg
cttcattttgctgataaggagctgtcttcacaacccgataagtcgcagatgtaa
DBGET
integrated database retrieval system
