Jatropha curcas (Barbados nut): 105630164
Help
Entry
105630164 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105630164 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105630164
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105630164
Surveillance factors
Other surveillance factors
105630164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
105630164
NCBI-ProteinID:
XP_012067285
UniProt:
A0A067L063
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MVHVKLSLSDDLLSSKFSVEQTSNHTKDEIWGGGTGEDKALVGLPDESKDHVPSDSSIPL
SPQWLYAKPVDAKIPTAGASGELRAPSSLSHGNISDNNLKDSWRLDGSQDKKDWRKISPD
LESSRRWREEERDTSLLGRRDRRKDDRRADAMPSRDISEGRPLPSSDRWHDNNSRNSGHE
SRRDGKWSSRWGPEDKEKDSRAEKKTDVEKEDTYVDKPSLINSSRTTSEREIDSREKWRP
RHRMEVQAGGTAAYRSAPGFGSERGRMEGSNVRFSAGRGRSNNYGSIQIGKHPSASAIGS
IPSDTNKSYCYPRGKLLDIYRRQKTLPNFGIMPDEMENVTAITQEVATQPLSFVPPNVEE
EAVLGDIWLGKIKSSRDSHDSLGDRNGASNDDIGGLGAATSEQNQSSSVKTDEIVEAFQK
VAFTDSCHDSGAELLDTSMADEMDASTDGELKFRTELHGALSLMPAVLKREDSQENAVEL
KAFEMQQVVDLAHMKHLKLEDAESATSFKIASHLPDDPKSLFDFPSGQQRLSNDHFAVES
NDEAHPLGSVIPPEELSLCYLDPQGAIQGPYLGIDIITWFEQGYFGTDLPVRLSDAPDGS
PFHELGEVMPHLKVKHGSVSGASKLSDPAGGSLEESVAPLVSTFDSEGDSAVRKDQPWAS
SGFEAILGANCQSKLYNNGIHSGLQFSNDQRFRQFAAQDEEIRFPGRPGSSSGDPLIRNS
TDIQSMVSCPPSHPSLANEFSGTSIHAPQDENVHPFGLLMSELRGNSQLRHVQSSNMSSS
IGDLGQTMDLLSERDIGFYNQSSFRALADQPTFMGTWPEDYNKNTLSNPSINIGSQDVHP
LSRRDRELSDFDVQHLILQNLEKEQLQQQNSLSPHPLSNTTRLGVEELPPHLQKLQFQQQ
RQLELQEQQRRLELQQQWHLKLHQQQRQLEQQRQLEQQRQMEKQRLLEQQRLLELQQQQQ
LLELHQQQRQMELQKQHQLMQHQLRHNQVKLLQQQQLQQQQQQQQVVLERLMQHRMSDFG
YSQSKMDPLMDNLLDPVQFRMQQPELQHSSHPSRHHDPSLEQIIRAKIGGNAFREPEADI
LDLLQAKHGNVVPPDQFHFQQEQLQAQQLSLALKQHLGMDGERHFNLPWSVDEAGHVSRN
SDVIYHPQSLGFDSSDFYRQQQRLSSQEEHLSQLKQRQALQERLQHGFYEPSSIEFERSM
VLPAVTPGMKLDNVNDRPQGLDSTERHLYTQSDDQLGSFSSDIPLRRRISNDFYGAQPER
DYIPVKNGPLEKGWVEGGMQQLHLETWQQGNVSEVTANSSIWAHEENSKRHLTDLQKELG
LQSIQSLENDYQHHISSSESQGSFWPIKESHSSNLAFNHVPDQEVATNSSFMKEPQNLNS
ASLLQDNVANVAIHGQNGEELLARSKSGALIEEQTFLSGTRNPSHTSFMDARFIGSSSLD
EDLPELEMKENIYGSKATVSMGRSVTQIEDNLVEQAEAAMDFGTIPVNASSSSSSRSSAA
GNQGLFVYEIGQNMSSARGEVSNDSVSSILTKGLDNASHKRPPVSRVLSSQDGLSDLASA
SNEKQKSSTRLPTSNEKKLDSVGYTAATSTAETQASGKKKEMRFRRTSSYSDATTVSETS
FIDVLKKPVLSEADSANMELSDGGSQAARSGKKKGKKGRQIDPALLGFKVSSNRIMMGEI
QGLDD
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtgaagcttagcctgtccgacgatctcctttcctccaagttctccgttgaa
caaacgtccaaccacaccaaagatgaaatctggggtggaggaactggtgaagacaaggcg
ctggtgggtttgcctgatgagtcaaaagatcatgtgccttcagatagcagcatacctctt
tctccacaatggctttatgctaaaccagttgatgctaagatcccaactgctggagcatca
ggggaactgcgtgcaccaagttctttatcgcatggaaacatctctgacaacaatttgaaa
gatagttggcgattagatggatcccaagacaaaaaagactggaggaaaatttcacctgat
ctagaaagcagccgccgatggcgtgaagaggagagagatacaagtttacttggtagaaga
gaccgcaggaaagatgatcgccgtgctgatgccatgccgtcaagagacatatctgagggt
agacctttgccttcttcagatcgttggcatgataataatagccgtaattctgggcatgaa
tctcggagagatggcaagtggtcgtcaaggtggggccctgaagataaagagaaggattct
cgggctgagaagaaaacagacgttgaaaaggaagatacttacgttgacaagccttcttta
attaacagcagccgcacaacttctgaacgtgagattgactctcgggaaaagtggaggcct
cgccatcgtatggaagttcaagctggtggaacagctgcgtatcgtagcgcaccaggattt
gggtcagaaagaggacgcatggagggatcaaatgttcgattttctgcaggacgaggaagg
tcaaataattacggaagcatacaaattggcaagcacccttctgcttctgctattgggtca
attccttcagatacgaataaatcatactgctaccccaggggaaaacttcttgacatttac
cgaaggcaaaaaactcttccaaattttggtatcatgcctgatgaaatggagaatgtaact
gcaataacacaagaagttgctactcagccattgtcttttgttccacctaatgtagaggag
gaggctgttcttggagatatatggctaggaaaaatcaaaagcagtagagactcacatgac
tcacttggtgacaggaatggggcatctaatgatgatattggaggccttggtgcagcaaca
agtgagcagaatcagagttcctcagttaagactgatgaaattgttgaagcttttcaaaag
gttgcttttactgattcttgtcatgatagtggggctgagttgctagatacatctatggct
gatgaaatggatgcttcaacagatggtgaattgaagtttaggacagaacttcatggagct
ttgagcttaatgcccgcagttctaaagagagaggattcccaggagaatgctgtggagttg
aaagcttttgaaatgcagcaagtggtggatttggctcatatgaagcacctaaagttggaa
gatgctgagtcagctacttcttttaaaattgccagtcacctccctgatgatccaaaatct
ctatttgattttccgtctggccagcaaaggctgagcaatgaccactttgctgtagaaagc
aatgatgaagcacatccactgggaagtgttatccctcctgaggagttgtctttgtgctat
cttgatcctcaaggggcaattcaggggccatatctggggattgatatcatcacatggttt
gagcaagggtattttggaactgatctacctgttcgtttgtcagatgctcctgatggatca
ccttttcatgaacttggtgaagttatgccgcatctaaaagtaaaacatggatctgtttct
ggtgcttctaagttatctgatcctgctggaggcagcttggaagagagtgtagctcctctt
gtttccacttttgactctgagggtgattctgctgttaggaaagatcagccatgggcttca
tctggatttgaggcaatcttaggtgctaattgtcagtcaaaactatataataacggcatt
cactctgggttgcagttctccaatgatcaaaggttccggcagtttgctgctcaagatgaa
gaaattcgttttcctggaaggccaggaagtagcagcggtgaccctttgataaggaattct
acagacattcagagtatggtttcctgtcctcctagtcacccttcccttgcaaatgaattc
tcaggaacaagcatccatgctcctcaggatgagaatgtgcatccatttggcctattgatg
tctgagctcagaggaaactctcagttgaggcatgttcaatcatccaatatgtcttcaagc
ataggtgatctaggtcaaaccatggatctcttatcagagagggatattggtttctacaac
cagagctcttttcgtgctctggctgatcaacctacttttatggggacatggcctgaggat
tataacaaaaatacactctctaaccccagtattaatattggttcacaagatgttcatccc
ttatctcgtagggatagggagcttagcgattttgatgtacagcacctaattttacagaat
ttagaaaaggaacaacttcagcaacaaaatagtttatctcctcatcccctttcaaatact
accagattgggtgttgaggagcttcctcctcatcttcagaaactgcaatttcaacagcag
cgacaattagagcttcaagaacagcaaaggaggttggagcttcaacaacagtggcatttg
aaacttcatcagcaacagcgacagttagagcagcagcgacagttggagcagcaacgacag
atggagaagcaacggctgttggagcagcaacggttgttggagcttcagcagcagcaacag
ctgttggagcttcaccagcagcagcggcagatggaacttcaaaagcagcatcagttaatg
cagcatcaacttcgtcacaatcaagtgaagttgctgcaacagcagcaactacagcagcag
cagcagcagcagcaagtagttcttgaacggttaatgcagcatcggatgtccgattttggt
tatagccaatcaaagatggatccactgatggacaacttgcttgatccagttcagttcagg
atgcagcagccagaattgcaacatagttctcatccttcaaggcaccatgatccatcactg
gagcaaataatccgagctaagattggaggcaatgcttttcgagaaccagaggctgatatc
ttagacttactgcaagcaaaacatggaaatgttgttcctcctgaccagtttcattttcag
caagaacagttgcaggcccagcaattatctttggcgctgaaacaacatttaggaatggat
ggagaaagacatttcaatctaccatggtctgttgatgaagctggtcatgtttctcggaat
tctgatgtcatttaccatcctcagtctttaggatttgattcttcagatttctaccggcag
cagcaaaggctttcgtcacaggaagagcatttaagccaacttaaacagagacaggctttg
caggagcgacttcaacatggattttatgaacccagctctatagaatttgagaggtcaatg
gttcttcctgctgtcactcctgggatgaaattggataatgtaaatgatcgtcctcaaggt
ctagattcaacagaaagacatttatatacacagtctgatgaccaactaggttctttctct
tctgatattcctctgcgtcgacgaatttcaaatgatttttatggtgctcaaccagaaagg
gattacatccctgtaaaaaatgggccgttggaaaaaggttgggttgaaggagggatgcaa
caactgcatcttgaaacttggcagcagggtaatgtttctgaagttactgcaaactctagc
atttgggcacatgaggagaactcaaagagacatttgacggatcttcaaaaagaattgggt
cttcaatctatccagtcattagaaaatgattatcaacatcatatttcatcttctgaatct
cagggaagcttttggccaatcaaggagtcacactcttcaaatcttgccttcaatcatgtc
ccagatcaagaagtagctacaaacagctcatttatgaaagagccacaaaatttgaattca
gcttctctattgcaagataatgtcgctaacgtggctatccatggtcaaaatggtgaagaa
ttgcttgctaggtctaaatctggagcactaattgaagaacagacattcttgtcaggcaca
agaaatccttctcatactagttttatggatgccagattcattggtagctcatctttggac
gaagatttaccagaactggaaatgaaggaaaatatttatgggtccaaagccactgtttca
atgggcaggtcagttacacaaattgaggacaacttggttgagcaagcagaagctgccatg
gattttggaacgatacctgttaatgccagtagcagtagtagttcacgaagcagtgctgct
ggaaatcaaggattattcgtctatgagataggacagaatatgtcatcagcaagaggggag
gtttccaatgatagtgtatcttctatcctaaccaaagggcttgataacgcttcgcataaa
cgcccccctgtatcacgggttttatcttcccaggatggtttgtcagacttggcctctgct
tcaaatgagaagcagaaaagttcaacgaggcttccaacttctaatgaaaaaaagcttgat
tctgtggggtatacagcagcaacttcgacagctgaaactcaggcatctggaaagaagaaa
gaaatgcgttttaggaggacctcatcttacagtgatgctaccacggtgtcagagacatca
tttatagatgtgcttaaaaagccagttctatccgaggctgattcagctaacatggaattg
tctgatggaggctcacaagcagcacgaagtggcaaaaagaaagggaagaaaggaaggcag
atagatcctgctctccttggcttcaaggtttccagcaaccggattatgatgggtgagatc
caaggccttgacgattaa
DBGET
integrated database retrieval system
