Jatropha curcas (Barbados nut): 105630341
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Entry
105630341 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: protein RAE1
KO
K14298
mRNA export factor
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105630341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105630341
03036 Chromosome and associated proteins [BR:
jcu03036
]
105630341
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105630341
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105630341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
105630341
NCBI-ProteinID:
XP_037494962
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MATFGAAAAANPNPNKSFEVAQPPSDSVSSLSFSPKANHLIATSWDNQVRCWEITRSGTT
VASVPKASITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAAHDAPIKEI
AWIPEINLLATGSWDKTLRYWDTRQPNPVLTQQLPERCYAMTVRHPLMVVGTADRNLIVF
NLQQPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVAAIEGKGFGVHQSNDASKSKNFTFKC
HRXGNEIYSVNSLNLHPVHHTFATAGSDGAFNFWDKDSKQRLKAMTRCPLPIPCSTFNND
GSIFAYSVCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGASGRK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttggtgctgcagcggctgcaaatccaaaccccaacaaatcttttgaggtg
gcgcaacctcctagcgactcagtttcgagtctcagtttcagtcccaaggccaaccacttg
attgctacttcttgggacaaccaggtaagatgttgggagattacgcggagtggaaccact
gtagcaagtgtgcccaaggcatccataacacatgaccaaccggttttatgctccgcctgg
aaagatgatggaacaacagtattttctggaggttgtgacaagcaagtgaagatgtggcct
ttactgtctggtggtcaaccagtgactgttgcagcacatgatgcaccaatcaaagagatt
gcatggattccggagataaatctgttggccacaggaagctgggataagaccttgaggtac
tgggatacaaggcaaccaaatccagtgctcacgcaacagcttcctgaacgctgctatgct
atgaccgtgcgacatcctttgatggttgttggtactgcggatagaaatcttatagtcttt
aacctgcaacaacctcagaatgagttcaagagaattgtttctcccctgaagtatcagaca
agatgtgttgcagcctttcctgatcagcaaggtttcctggtggctgcaatcgagggtaaa
gggtttggtgtacatcaatctaatgatgcaagcaagtccaagaacttcacttttaaatgc
catagangaggcaatgaaatatactcggtcaactccttaaatcttcatccggtgcatcat
acgtttgcaaccgcagggtctgatggtgcttttaatttttgggacaaggatagcaaacaa
agacttaaggcgatgactcggtgccctcttcctataccctgcagcactttcaacaatgat
ggctcaatatttgcatattcggtgtgttatgactggagcaagggtgcagaaaatcacaac
ccgcaaacagcaaagacctacatctatctgcatttaccacaggaatctgaggttaagggc
aagccacgtgttggagcaagtggtagaaagtaa
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