Jatropha curcas (Barbados nut): 105630445
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Entry
105630445 CDS
T03922
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03420
Nucleotide excision repair
jcu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105630445
09124 Replication and repair
03420 Nucleotide excision repair
105630445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105630445
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105630445
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105630445
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105630445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD_LRWD1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
PQQ_3
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105630445
NCBI-ProteinID:
XP_037494768
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAPQTRRMAFPKVVIERETDSEQSSSDDDGDIEEEEEEDGPQSEVSEEEEEGGGENGNGD
KNEEDLGSKKKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTI
TCPHRVATEYGVIPAPQRNTHNPLEYVFQRQLRPHIPPIKPPFVVPDQVCCAVIRYHSRR
VTCLEFHPTKNNVLLSGDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTVYA
ASSDGTISCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDINSEKGVVLVADNFGFLYI
VDMRSNSKTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSSLCD
LVHKRVVNCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFR
AEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDTSNGQLVAEVMDPNITTITPVNKLH
PRDDILASGSSRSLFIWKPKDKSELAEQKEDRQIVICGNAEKKSKRKFGGGSDDDSDDDG
LFKSKGKKSTLKKSQSKPVHCPRKVKR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggccccacaaacgagaagaatggcatttccaaaggtagtgattgagagggaaacagat
tctgaacagagctcatcagatgatgacggtgatattgaagaggaagaagaggaggatggc
ccccagtcggaagtatcagaggaagaagaagaaggaggtggagaaaatggaaatggtgat
aaaaatgaagaggatttgggttccaagaagaaagggaaagcacccattactattagtctc
aagaaagtctgcaaagtttgtaagaaaccgggtcatgaagcgggattcaaaggagctaca
tacatagactgtcctatgaagccctgctttctctgcaaaatgcctgggcacactacgatt
acttgcccacatagagtggctactgaatatggggtcatcccagcaccccaaagaaatacg
cataacccattggaatatgtcttccagcgccagctcagaccgcacatccctccaataaag
ccaccatttgtcgttccagatcaagtatgttgcgcagttatcaggtatcacagtaggcgg
gtgacatgtttggaattccacccaacaaaaaataacgtccttttatctggggataagaaa
ggacaagttggagtttgggattttgagaaagtgcatgagaaaatggtatatggaaacata
cacacttgtattgtcaataacatgaggtttaaaccttcaaatgatggtacggtgtatgct
gcatcctcagatggaactattagttgcactgacatggagactggaatttcaacatctttg
atgaaccttaaccctgatgggtggcagggaccgagcagttggagaatgctttatggcatg
gatatcaactcagaaaaaggtgttgtgcttgtagctgataattttggttttctctacata
gttgatatgcgctccaacagtaaaactgggcaaccaatcttgatccataagaaaggtagc
aaagttgttggccttcattgcaatccagttcatccagagcttcttttgagctgtggaaat
gatcattttgctcgcatttgggatatgcgtcgacttgaagctggatcttctctttgtgat
cttgtgcacaaacgtgttgttaattgtgcatatttctctccattgtctgggagcaaaatt
cttaccacctctcaagataaccgtcttcgtgtatgggattctatctttggaaatttggat
tccccaagccgagagattgtacatagtcatgatttcaacagacatctaactccttttcga
gctgaatgggatcctaaggatccttcagaatcccttgcagttattggtcgttatataagt
gaaaattacaatggtgctgctttgcatcccattgatttcatagataccagcaatgggcaa
ctagttgctgaagttatggatcctaacatcacaactattactcctgtaaacaagctacac
cctcgagatgatattttggcatctggcagttcaaggtcccttttcatttggaagccgaag
gacaaatctgaacttgcagaacagaaggaagataggcagattgttatttgtggaaatgct
gagaagaagtccaaacggaagtttgggggtggaagtgatgatgattctgatgatgatgga
ttattcaaatccaaaggcaagaagtctacgttgaaaaaatcccaatcaaaaccagttcac
tgtcctcgcaaagttaaacgctag
DBGET
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