KEGG   Jatropha curcas (Barbados nut): 105630445
Entry
105630445         CDS       T03922                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03420  Nucleotide excision repair
jcu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105630445
  09124 Replication and repair
   03420 Nucleotide excision repair
    105630445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jcu04121]
    105630445
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105630445
Ubiquitin system [BR:jcu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105630445
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105630445
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD_LRWD1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd PQQ_3 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 105630445
NCBI-ProteinID: XP_037494768
LinkDB
Position
Unknown
AA seq 567 aa
MAPQTRRMAFPKVVIERETDSEQSSSDDDGDIEEEEEEDGPQSEVSEEEEEGGGENGNGD
KNEEDLGSKKKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTI
TCPHRVATEYGVIPAPQRNTHNPLEYVFQRQLRPHIPPIKPPFVVPDQVCCAVIRYHSRR
VTCLEFHPTKNNVLLSGDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTVYA
ASSDGTISCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDINSEKGVVLVADNFGFLYI
VDMRSNSKTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSSLCD
LVHKRVVNCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFR
AEWDPKDPSESLAVIGRYISENYNGAALHPIDFIDTSNGQLVAEVMDPNITTITPVNKLH
PRDDILASGSSRSLFIWKPKDKSELAEQKEDRQIVICGNAEKKSKRKFGGGSDDDSDDDG
LFKSKGKKSTLKKSQSKPVHCPRKVKR
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggccccacaaacgagaagaatggcatttccaaaggtagtgattgagagggaaacagat
tctgaacagagctcatcagatgatgacggtgatattgaagaggaagaagaggaggatggc
ccccagtcggaagtatcagaggaagaagaagaaggaggtggagaaaatggaaatggtgat
aaaaatgaagaggatttgggttccaagaagaaagggaaagcacccattactattagtctc
aagaaagtctgcaaagtttgtaagaaaccgggtcatgaagcgggattcaaaggagctaca
tacatagactgtcctatgaagccctgctttctctgcaaaatgcctgggcacactacgatt
acttgcccacatagagtggctactgaatatggggtcatcccagcaccccaaagaaatacg
cataacccattggaatatgtcttccagcgccagctcagaccgcacatccctccaataaag
ccaccatttgtcgttccagatcaagtatgttgcgcagttatcaggtatcacagtaggcgg
gtgacatgtttggaattccacccaacaaaaaataacgtccttttatctggggataagaaa
ggacaagttggagtttgggattttgagaaagtgcatgagaaaatggtatatggaaacata
cacacttgtattgtcaataacatgaggtttaaaccttcaaatgatggtacggtgtatgct
gcatcctcagatggaactattagttgcactgacatggagactggaatttcaacatctttg
atgaaccttaaccctgatgggtggcagggaccgagcagttggagaatgctttatggcatg
gatatcaactcagaaaaaggtgttgtgcttgtagctgataattttggttttctctacata
gttgatatgcgctccaacagtaaaactgggcaaccaatcttgatccataagaaaggtagc
aaagttgttggccttcattgcaatccagttcatccagagcttcttttgagctgtggaaat
gatcattttgctcgcatttgggatatgcgtcgacttgaagctggatcttctctttgtgat
cttgtgcacaaacgtgttgttaattgtgcatatttctctccattgtctgggagcaaaatt
cttaccacctctcaagataaccgtcttcgtgtatgggattctatctttggaaatttggat
tccccaagccgagagattgtacatagtcatgatttcaacagacatctaactccttttcga
gctgaatgggatcctaaggatccttcagaatcccttgcagttattggtcgttatataagt
gaaaattacaatggtgctgctttgcatcccattgatttcatagataccagcaatgggcaa
ctagttgctgaagttatggatcctaacatcacaactattactcctgtaaacaagctacac
cctcgagatgatattttggcatctggcagttcaaggtcccttttcatttggaagccgaag
gacaaatctgaacttgcagaacagaaggaagataggcagattgttatttgtggaaatgct
gagaagaagtccaaacggaagtttgggggtggaagtgatgatgattctgatgatgatgga
ttattcaaatccaaaggcaagaagtctacgttgaaaaaatcccaatcaaaaccagttcac
tgtcctcgcaaagttaaacgctag

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