Jatropha curcas (Barbados nut): 105630615
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Entry
105630615 CDS
T03922
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105630615
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Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
105630615
NCBI-ProteinID:
XP_012067875
UniProt:
A0A067L2C6
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All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MSSGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGHYYPGRVSRWWLKQSLA
HLDSSLRSLGTTLVTKRSTDSVSTLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKGVLTA
HGIAVRSFNADLLYEPWDVNDAQGRPFTTFAAFWERCLSMPYDPEAPLLPPKRIISGDMS
KCPSDALIFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSKNRRKADSATTS
FLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYMSFNHP
YSHERPLLGHLKFFPWVVDGGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF
FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDP
NGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLQEAL
LEMWQHEAASRAAIENGTEEGLGDSSDLASIAFPEDTQMEENHEPGRNNPPHTIRYYEDQ
MVPSMTTSLLRVEEEETSSDLRNGAEDSRAEVPRNVNINQEQRRDNLNPGATQTIRSNNS
FPHFNVVGAFGNTEDSTAESSSSSRRERDGGIVPVWSPPSASNSEQFVGDESGIGASSSY
LERHPQSHQIINWRRLSQTG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgggtgtagcatagtctggttcagaagagatctgagggtagaagataaccca
gcactagcagctggtgttagagctggtgctgtagttgctgtttttatatgggcacctgaa
gaagaaggtcattattaccctggtagggtttcaaggtggtggcttaaacaaagtttggct
catttggattcttctttgagaagccttggtactactcttgttaccaaaagatcaactgat
agtgtttctactcttcttgaggttgtcaaatctactggtgctactcagatcttcttcaat
cacttgtatgatccattgtcactggttagggatcaccgggcaaagggggttttgactgct
catgggatagctgtaagatcctttaatgcagatttgctttatgaaccttgggatgttaat
gatgctcaaggacgccctttcactacctttgctgccttttgggaaagatgccttagcatg
ccttatgatccagaggctccacttctccctcctaagaggattatttcaggtgacatgtct
aaatgcccttcagatgcactgatatttgaagatgaatcagagaaaggaagcaacgcattg
cttgctcgagcatggtcacctggatggagtaatgctgacaaggctttgaccacattcatc
aatggaccattacttgagtattctaagaaccgtaggaaggctgacagtgctacaacatct
tttctttctccccatttgcattttggggaggttagtgttagaaaagtatttcatcttgtc
cgcatcaagcaggttctgtgggcgaatgaagggaacatagctggtgaagagagtgtaaat
ctgtttctcaagtcaattggtcttcgagaatattcaaggtacatgagttttaaccatccc
tacagtcatgaaaggcctctcctagggcaccttaaattttttccttgggttgtggatgga
ggctattttaaggcttggagacaaggtagaactggttatccattagttgatgcaggaatg
agagagttatgggccactggttggttgcatgatcgaatacgagttgtagtttctagtttt
tttgtcaaggttctacagcttccgtggaggtggggaatgaagtatttctgggatactctt
ttagatgcagatttggagagtgatgctcttggttggcagtacatttcgggtactctccct
gatggccgtgagtttgatcgcatagataatccacagttcgaaggttacaagtttgaccca
aatggagaatacgtccgacggtggcttcctgaactttccaggctacctactgaatggatt
catcatccatggaatgcacctgaatctgtgctccaagctgctggaattgagcttggttca
aattaccctcttccaattgtagggatagatgcggctaaagttagactgcaagaagcactt
ttggaaatgtggcagcatgaagctgcttccagagctgccattgaaaatggaactgaagaa
gggcttggagattcatctgatttggcctcaattgccttccctgaagacactcaaatggaa
gagaaccatgaacctggaagaaataatccccctcatacaattcggtattatgaggatcag
atggtcccaagcatgacgacttctttgctaagagttgaagaagaagaaacttcttcagat
cttcgaaatggagcagaagatagcagagcagaggttccaagaaatgtaaatatcaatcaa
gaacaaagaagagacaatttaaacccgggagccacgcagactatccgcagcaacaacagt
tttccgcattttaatgtggttggagcttttggaaatactgaagattcaacagcagaatcg
tcaagtagtagtaggagagaaagggatggaggtatagttccagtctggtctcctccatct
gctagtaactcagagcagtttgtaggggatgaaagtggaatcggagcaagttcttcttat
ttggagaggcatccacaatctcaccagataattaattggaggcggctctctcagactggg
taa
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