Jatropha curcas (Barbados nut): 105630737
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Entry
105630737 CDS
T03922
Name
(RefSeq) rhamnogalacturonate lyase isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105630737
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105630737
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Ig_DR_A0283-like
CarbopepD_reg_2
Endotoxin_C
EMC7_beta-sandw
SpaA
Motif
Other DBs
NCBI-GeneID:
105630737
NCBI-ProteinID:
XP_037496376
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All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MAFADKVLIISSLSFSLCFLELSASFSSLRYQNSYSHTDQEIPEAVRLQIQENYVVLDNG
FVQVTISLPEGFITGIQYNGINNLLEVLNEESDRGYWDLVWSDESTTRKKGNFDRMEGTN
FKIVVQNEDQIELSFTRTWNSSLHGKLVPLNIDKRYVILGGSSGFYTYAIYEHSEEWPAF
NLDNTRIAFKPRKDKFNYMAVADNRQRYMPSPDDRLVGRGQALAYPEAVMLVNPIEPEFK
GEVDDKYEYSCESRDIRVHGWISTDSAVGFWLITPSIEFKSGGPLKQYNTAHVGPTILSV
FHSTHYAGLDMTTTFGPHEPWKKVFGPVFAYFNSVQDKSDSLPLWEDAKKQMINEVQKWP
YDFPGSEDFPPSDQRGQVHGRLLVLDRDVRKGNIPANGAFVGLASPGDTGSWQIQSKGYQ
FWSKTDKDGQFTINNIRTGDYNIYAWVPGFIGDYKYDKVITISTAGSNIDVDDLLYEPPR
NGSTIWEIGIPDRSANEFYIPDSNPKYVNKLYLNHDRFRQYGLWERYTELYPDNDLVFNI
GASNYSTDWFFAQVTRKKENNTYEGTTWQIKFKQETVDRTATYKLRLALATAHNVDLQVR
INDVNASSPLFSTGNIGKDNTIARHGIHGLYRLFNVDVPGAHLVEGINTIFLTQTADQSP
FQGIMYDYIRFEGPPSSNTIK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgcagacaaagttttaattatctcatctttgtccttctctctgtgtttctta
gagttgtctgcttcattctcttcactacggtatcagaattcatattctcataccgatcaa
gaaataccagaggcagtgcgactccaaattcaagaaaattatgtggtgctcgataatggc
tttgtccaggtaacgatatcattgccggaaggattcatcaccggaatacagtacaatggc
atcaacaatttgcttgaagttcttaatgaagaaagtgacagagggtactgggatctcgta
tggagtgatgaatcaactactcgaaaaaagggtaactttgacaggatggaaggaacaaat
ttcaaaatagtagtacagaatgaggatcagatagaactttcgttcacaagaacatggaat
tcctctcttcacggaaagcttgttccattgaacatcgataaaagatatgtaattcttggt
ggttcgtcgggtttctacacttacgcaatttatgagcactcggaggaatggcctgctttc
aatcttgacaatacaaggattgctttcaagcctagaaaagacaagtttaactacatggcc
gtagcggacaatagacagagatatatgccatcacctgatgatagattggtgggaagaggc
caagctctagcctatccagaggcagtgatgcttgtgaatccaattgaaccagaatttaag
ggagaggtagatgacaaatatgaatactcatgtgaaagccgggacatcagagttcacggt
tggatttccacagactcggccgttggcttttggctaatcactcctagtatcgaattcaag
tccggtggaccccttaagcagtataatacagcccatgtgggcccaacaatcctttcggta
tttcacagtactcattatgcgggattagacatgacaacaacttttgggccgcatgagccc
tggaagaaagtattcggccctgttttcgcctatttcaattcggtgcaggacaaaagcgat
tcgcttccactttgggaggatgctaaaaaacagatgataaatgaagttcaaaagtggcct
tatgactttcctggttctgaagattttccaccgtcggatcaacggggtcaagtccatggc
agattactagtcttagatagggatgtgaggaaaggaaacatacctgcaaatggagctttt
gttgggctggcatccccaggagatactggttcctggcaaatacaatccaagggttaccaa
ttctggagtaaaacagataaagatggacaatttacaatcaataatataaggaccggtgat
tacaatatctatgcatgggttcctggatttattggagattataagtatgacaaagtcatt
acgataagcacagcaggaagtaatattgatgttgatgatcttttatacgagcctccaagg
aatggctctacaatatgggaaataggaattcctgatcggtctgccaatgaattctatatt
ccagattccaatcctaaatatgtcaacaagctttacctcaatcatgataggtttcgacaa
tatggattatgggaaagatacacagagttgtatcctgataacgatttggtgttcaatatt
ggcgctagtaattattcaacagattggttttttgcacaagtaacaagaaagaaggagaat
aacacatatgaaggaactacatggcaaataaagttcaagcaagaaacagttgatcgaaca
gcgacatataaactacgtttggcacttgcaacagcacataatgttgatttacaggttcgg
attaatgatgtaaatgcaagttctcctttattttcaactggaaatattgggaaggacaat
acaatagcgagacatggaattcatgggctgtacaggctattcaatgtagatgtaccagga
gctcaccttgttgaagggattaacacaatctttttgacacaaacagccgatcaaagccct
ttccaagggattatgtacgattacattcgctttgaaggccctccatcttccaacaccatc
aaatag
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