Jatropha curcas (Barbados nut): 105630869
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Entry
105630869 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105630869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105630869
03036 Chromosome and associated proteins [BR:
jcu03036
]
105630869
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105630869
Coactivators
SAGA/TFTC/STAGA complex
105630869
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105630869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF4513
Motif
Other DBs
NCBI-GeneID:
105630869
NCBI-ProteinID:
XP_012068246
UniProt:
A0A067LC15
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MDPSSSIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVSNSQPSDPAVLFHETNQTPN
QPFPNWQTTIQDDNSNGPRQQQQVQQSSVVEELKQHASAAENQHILNDATRESSHFSLNQ
KQQKDDVQQGQTEQVPVQTPTTTGMQISDRNPMPISEPNKMQNPDTELQYMKVQKMGNQQ
TLGMEQPGNLKNQSNQIPFGLLLPALKPHLDKDREMQLQTIFNKLRKNDIAKDQFVRHMR
NIVGDQVLRRAITQLQSQPGPNQSQLQSQALARQNNVRIPVSAGAASVVQVQADSRFRTA
ENNAHKSHEVERKPDSHGIQVSQIPSSSASIVKQEREWSSIPVPGHSKPQQPVHFPQTTF
STYGSNTGAYPYSGTNVNTSGSSMKVQAHDLQQMVQISHQTMGATQIGGSAQTMNMISVP
KFERTNSVTDPSRVHSGSISQYANKSAGQQVTASWQATTNKEQNSSPFSSANYVKQEPGE
QAAEQHQKSQLPNSQGVSATTIEQGNTVPGNLKDESSEKLQSSKVGFSTPTGILPSNSAS
PSIVTQLDPNAQVGSRVPSASASAGINIRTPPKKPSIGQKKPLEALGSSPPMSSKKQKVS
GAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRRVVQEEEERLILQKTP
LQKKLAEIMVKCGLKNINNDVERCLSLCVEERMRGLISNLIRLSKQRVDAEKSRHRTIVT
SDVRQQIMKMNQKAREEWEKKQSEAEKLRKVNEPEGDNEVEGDKEKDDGRVKPVKANKEE
DDKMRTTAANVAARAAVGGDDMMSKWQLMAEQARQKREGSTEATSGPQSAKDSRKPPSTA
GRNMKDNQEPEKRSPAAASTGPVRKFGRNQGIVPQNRVARSISVKDVIAALEREPQMSKS
TMVYRLYERTRSDTPTE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcgtcatcaataatgaagcttctggaagaagacgaggacgaaactatgcac
tctggtgctgacgtggaggcattccaggctgccctgaaccgggatattggaggcgatgtc
tctaattctcagccgtctgatccggctgttttattccatgaaaccaatcaaactcccaat
cagccatttccaaattggcaaactaccatacaagatgataattccaatggtccaagacag
caacagcaagtgcagcagtcgtctgtagtggaggagctaaagcagcatgcttctgctgct
gagaatcagcacatactgaatgatgccacacgggagtccagtcacttttcattaaaccag
aaacaacaaaaagatgatgttcaacaagggcagacagagcaagttcctgtccagactcct
acaacaaccgggatgcaaatttctgatagaaatcctatgccaatatctgagcccaacaaa
atgcaaaatccagacactgaactccaatatatgaaggtacagaagatgggtaatcaacaa
accttgggcatggagcagcctggtaacctgaagaatcaaagcaatcagataccatttggg
ttattgctgcctgccttaaagccccatcttgataaagacagagagatgcaacttcaaact
atatttaataaactgaggaaaaacgatattgcgaaagatcaatttgtcaggcatatgaga
aatattgtaggggaccaagtgctgagaagggctataacgcaattgcagtcacagccaggt
cccaaccaatcccaattacaatctcaagctttagcacgccaaaacaatgtgagaattcca
gttagtgctggtgctgcttcagtagttcaagtgcaggctgattctagattccgaactgca
gaaaataatgctcataaatcgcatgaggttgaacgtaagccagattctcatggaatacaa
gtaagccaaattccttcatccagtgctagcatagtcaagcaagagagggaatggtcttca
attccagtgccaggacacagcaagccgcagcaacctgtgcactttccacagactaccttt
tcaacgtatggaagtaacaccggtgcttatccatattctggaacaaatgtcaatacctca
gggtcatccatgaaggtgcaagctcatgatttgcaacaaatggtgcaaatatcacatcaa
accatgggtgcaactcagataggaggttcagcccagacaatgaacatgatcagtgtgcca
aaatttgagaggacaaattctgttacggatcccagcagagtgcacagtggttctatttct
caatatgcgaacaaatcagctggccaacaagtaacagcttcatggcaagcaacgacaaat
aaagagcaaaattccagtcctttctcatcagcaaattatgtaaaacaggaaccaggtgaa
caggctgccgaacaacaccagaaatcccagttgcctaactctcagggtgtatctgcaaca
accattgaacaagggaatacagtacccggaaatttaaaagatgagtcttcggagaagctg
cagtcttctaaagttggtttctccacacctactggtattttgccctcaaattcagcttct
ccttccattgtgactcaactggaccccaatgcccaggtgggctctcgggtcccatctgca
tccgcttctgctggaattaatataagaacacctccgaaaaagccttctatcggccaaaag
aagccacttgaagcacttggttcttctccacctatgtcaagtaaaaagcaaaaagtatct
ggggcattcttggatcaaagcattgaacaactcaatgatgtcactgctgtcagtggagtt
aatctgagggaagaggaagaacaactattttctgggtccaaggaggacagtcgagtttca
gaagcatctaggagggttgtacaagaagaagaagaaaggctgattttgcagaaaactcca
ctacagaaaaaattggcagagatcatggtcaaatgtggtttgaaaaatataaacaatgat
gtggagcgatgcttgtccttgtgcgtggaggaaagaatgcgtggacttataagtaacttg
atcaggctatcaaagcagcgggttgatgctgagaagtctagacaccgaactatagttacc
tctgatgttcggcaacaaatcatgaaaatgaaccagaaagctagagaagaatgggagaaa
aagcaatctgaagcagaaaagcttcgaaaagttaatgaacctgagggtgataatgaagtt
gaaggcgataaggagaaagacgacggtcgggttaaaccagtgaaggcaaacaaggaagag
gatgacaaaatgaggacaacagctgcaaatgttgctgcccgagctgctgttggtggagat
gacatgatgtcaaaatggcaactcatggctgagcaagcccggcagaaacgtgaaggttca
acggaggcaacatctggtcctcagtcagcaaaagatagccgcaagcctccgtcaacggct
ggaagaaatatgaaggacaatcaagaaccagaaaagagaagccctgcagctgcatcaaca
gggcctgttaggaaatttgggaggaaccaaggaatcgtaccacaaaatagggtggctcgc
agtatttcggtgaaggatgtgattgcagcgctggaaagagaaccccagatgtcgaaatct
acaatggtttatcgactgtatgagagaacccggtctgatactccaactgaataa
DBGET
integrated database retrieval system
