Jatropha curcas (Barbados nut): 105631110
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Entry
105631110 CDS
T03922
Name
(RefSeq) uncharacterized protein LOC105631110 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105631110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105631110
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105631110
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105631110
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105631110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
105631110
NCBI-ProteinID:
XP_012068502
UniProt:
A0A067LAE3
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MQPHYNSHPQRSNQIQSNGTTAPVQAQVFSTNPSLANFYNMLQNSMPMQPQLGIINPQLP
VPFNNSNVIMPNMPPLMTQQPGFSNHMGINQMGFAPQNHLNNINTIPMFVNQANPGQPQG
QPYALNFSNLPQNHNQNMGFPNLQNLMQNLSAVMPIPMPNPSVTNGPQNPNFFANPLFMV
GQHGNANQPNFVEDKRTEQVQGNSSIMPQTQNSRSLGSFRRQGNPVNNGQNSTSGPNWKN
FASKNFKKNPNKEASNLGYQKSQFHHMNNGKRKFGSSNEHRGKGYGNERASKYARTNSAE
QATEKKRPLALTYTEQEIKQWREDRRKNYPSKAKIDKKSSERQANSEVSRKEAKQRREQL
KEILAKQAELGVEVAEIPPYYLSDSEKQVNERENNHRFVGKKGRFQNKHDRRGRYNKNDR
SAKQQKLMNNDSSQISSFNTKKPTLLQKLLSADVRRDKHRLLQAFRFMVMNYFFDDLPEK
PLEFPLIAVKEDEREDLAVAETSSLAQKDILEVTSFGRAGGGDEDDDSHDYERVEQINRT
EEEEGEIID
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcattataattcccatcctcaacgttccaatcaaatccaatccaatggtact
actgctccagttcaggcacaggttttctctacaaatccttctctagcaaatttctacaac
atgttacaaaattctatgccgatgcaacctcaactgggcatcatcaatcctcaacttcca
gttcctttcaacaattccaatgtcattatgcccaatatgccccctttgatgactcaacaa
cctggtttcagtaatcatatgggtataaaccaaatgggttttgctccacaaaatcattta
aacaatataaacactatccccatgtttgtgaatcaagcaaacccgggtcaacctcaaggc
caaccatatgctcttaatttctccaatttgcctcaaaatcataaccaaaatatgggtttc
cccaatctacaaaatctaatgcaaaatctgagtgctgtcatgcctatcccaatgccaaat
ccttctgtaaccaatggtccacaaaatcccaactttttcgcaaatcctttgttcatggtt
gggcagcatggcaatgcaaatcagccgaactttgtggaggataaaagaactgaacaagta
caagggaactcatccataatgccacaaactcagaactcaagatccttgggctcatttagg
cggcagggtaatcctgttaataatggccaaaatagtacttcaggtcccaattggaaaaac
tttgccagcaaaaacttcaaaaagaatccaaataaagaggcatcaaacttgggatatcag
aaatctcaattccatcatatgaataatgggaagaggaagtttgggtcttctaatgaacac
aggggaaaagggtatggcaatgagagggcaagtaaatatgctcgcactaattctgcagaa
caagctacggaaaagaaaaggcctcttgctttgacctatacggaacaagaaatcaaacaa
tggcgtgaagatcgaaggaagaactacccgtcaaaagccaagattgataagaaaagtagt
gaaagacaagcaaactctgaggtcagtagaaaagaagccaaacaacgccgagagcaacta
aaggagattttagcaaagcaggctgagttgggagttgaagttgcagaaataccaccatac
tacctgtcagattcagagaaacaagtaaatgaaagggaaaataatcataggtttgttggc
aagaagggtagatttcagaacaagcatgatagaagagggagatataacaaaaatgatcgg
tctgccaagcagcaaaagttaatgaacaatgactcatcacaaatttcttccttcaacaca
aagaagccaacacttttgcagaagcttctaagtgcggatgtaaggagagataagcaccgc
ttgttgcaggcttttaggttcatggtgatgaattatttctttgatgacctaccagagaaa
ccattggaatttcctttgatagcagtcaaagaagatgagagggaggacttagcggtagca
gaaacatcctcacttgctcagaaggatattttggaagtaacaagttttggtcgtgctgga
ggtggagatgaagacgatgatagtcatgattatgaaagagtggaacaaatcaacagaact
gaagaagaggagggagaaatcattgactaa
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