Jatropha curcas (Barbados nut): 105631219
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Entry
105631219 CDS
T03922
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105631219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105631219
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105631219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WD40_like
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
105631219
NCBI-ProteinID:
XP_012068649
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MMYGDPQHQHQQQQQPGGGEFLRGPPPPAPMMRQPSASSTTLNPSDYHHPSAPAPGPPPP
SYDTAHGDNFGAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDML
PTAAYSDNPSTSFAAKFVHTSLNKNRCSINRVLWTPNGRRLITGSQSGEFTLWNGQSFNF
EMILQAHDQAIRSMVWSHNDNWMISGDDGGTIKYWQSNMNNVKAHKSAHKESIRDLSFCR
TDLKFCSCSDDTTVKVWDFARCHEERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWD
AKSGRELCSFHGHKNTVLCVKWNQNGNWILTAAKDQIIKLYDIRAMKELESFRGHRKDVT
ALAWHPFHEEYFVSGSFDGSIFHWIVGHETPQIEVPSAHDNSVWDLAWHPIGYLLCSGSN
DHTTKFWCRNRPGDTARDKFNMGQNQGYGEQNPALGGRLPGNFPIPEAPTTPGPFPPGLT
RNEGTIPGVGAAMPLTIPSIDTSAQGEQKQPLPMSIPLGAPPLPPGPHPSLLAANQQQGY
QQNPQQMPQQQQQAHPQQMPNLPLPPPHMRPLQPPSHLPLLPHPQLSRPPQMPPHAMPQS
MPGSLPAPSSMPTSHPMPMPGPMGMQGTMNQMVPPMQQGHFMGMNPMHSGPLPTSAAPPV
GGFPNGLPNMQGPSNATGGQMFPQGGPFNRPQGGQMPMMPGFNPYQSGNQSGMPPPLPPG
PPPHSQTPQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatggtgatccgcaacaccaacaccaacagcagcaacagccaggcggcggcgaa
ttcctcagaggtcctccgccaccggcaccaatgatgcgacagccttctgcctcttcaact
actctcaatccctcagattatcaccacccttcagctcctgctcctggccctcctccccct
tcttacgacacagctcatggagataatttcggtgcaaaaagaatgagaaagcttacacaa
aggagagcagttgattatacgagcactgttgtccgttatatgcagattcgtatgtggcag
cgagattcgagggacaggacagtattgcaggctactccagcagcagcaatcgatatgtta
ccaacagctgcctattctgataacccatcaacaagctttgctgcaaaatttgttcataca
tctcttaacaagaaccgttgttcaattaatcgagttttgtggactcctaatgggagacgt
ctaatcactggttctcaaagcggtgaattcactctttggaatggacaatcatttaacttt
gaaatgattctacaggcgcatgatcaagccatcaggtccatggtatggagtcacaatgac
aactggatgatctctggtgatgatggtggtacaattaagtactggcagagcaacatgaat
aatgttaaggcacataaatctgctcataaagaatcaattcgtgacttaagcttctgtagg
acagatttgaaattctgttcttgctctgatgatactactgtcaaagtatgggactttgct
cgatgccatgaagagcgttcattaactggccatggttgggatgtcaagagtgttgactgg
caccctacaaaatctctacttgtttcaggtgggaaagacaaccttgtaaaactctgggat
gctaaaagtgggagagaactttgctcatttcatggccacaaaaatacagtgctttgtgtc
aaatggaatcaaaatggtaactggattctaactgctgcaaaggatcaaatcattaagctt
tatgatattagggcaatgaaggagcttgaatctttccgcgggcaccgaaaggatgtgact
gcattggcttggcatccatttcatgaggagtattttgtcagtgggagttttgatgggtcc
attttccactggattgttgggcacgagactccccagattgaagttcctagtgctcatgat
aatagtgtgtgggatcttgcatggcatcctattggatatcttctttgcagtggtagcaat
gatcatacaacaaagttttggtgcagaaataggccaggagacactgctcgggataaattt
aacatgggtcagaaccaaggttatggtgaacaaaaccctgctcttggtggccgcttgcct
ggcaattttcctattcctgaagcaccaacaacaccaggaccatttcctcctggattgact
cgaaatgaaggaaccattccgggtgttggagctgcaatgccattaacgattccatctatt
gatacatcagctcagggagagcagaaacagcctcttccaatgtccattcctctaggagcg
cctcctctacctcctggtccacatccatctcttcttgctgccaatcagcagcagggatat
caacaaaatcctcagcagatgccacagcagcaacaacaggcacaccctcagcaaatgccc
aatttgcctttgccaccaccacatatgcggccgttacagcctccatcacatttacccctg
cttcctcatcctcagttatctcgcccgccacaaatgcctcctcatgctatgcctcaatca
atgccaggatccttgcctgcaccttcatcaatgcctacatcacatccaatgccaatgcct
ggtccaatggggatgcaaggtacaatgaatcagatggtccctccaatgcaacaaggccat
tttatgggcatgaatccaatgcattctggacccttacccacaagtgctgcccctccagtt
gggggctttcctaatggcctaccaaatatgcaaggcccatcgaatgcaactgggggtcaa
atgtttccacaaggtggtccattcaatcggccgcaaggtggacagatgccaatgatgcca
gggtttaatccctaccagtctggaaatcaatctggtatgcctccaccactaccaccaggt
cctccgcctcattcccaaacacctcagtag
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integrated database retrieval system
