Jatropha curcas (Barbados nut): 105631400
Help
Entry
105631400 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X2
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105631400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105631400
03036 Chromosome and associated proteins [BR:
jcu03036
]
105631400
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105631400
Coactivators
SAGA/TFTC/STAGA complex
105631400
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105631400
STAGA complex
105631400
TFTC complex
105631400
SAGA complex
105631400
SLIK complex
105631400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
105631400
NCBI-ProteinID:
XP_012068890
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MAESAASSPKPIPSPNPMDPSPPPPSQQAQPQSQQLPPTVNSNTTALTPPQPQAQTPTPN
MSNLAQNPQISSPSIDQQISSPPLSSQQQQQPTVQQQQQQQQTQQQLQQQNVAAMPSYQI
PQTLQRSPSLSRLSQINQQQQQQNQYGSVLRQQQQQGLYGQVNFGGSGSIQQNLQQNSQN
QQMGGANLSRSALLGQNGHLPILPGPAAVAAAAQLNLLASPRQKAGLVQGSQFHPGTSPG
QPLQGMQAMGVMGSLNLSSQLRPNSALAYAQQRINAGQMRQQLAQQNSLTSSQVPNLSRT
SSLAFMNPQLSGLVPNAQPGMMQNSLSQQQWLKQMPAISGPASPSFRLQHQRQTQVLLPQ
QLVSSPQLHLNAQQLSQLVQQQPSMGHQQLQQQQQQQQQQQQQPQQQQQIQQQQQLQPQQ
QLQQQLPLHQQQQQQSPRMQGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLL
GKRKIQDLVSQVDSQGKLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLL
HLEKNWQLTIPGFSTEERNFQRKPLSSDLHKKRLDMICALRESSHMETNNHNPKEMIRQG
LGNPVVTNHLIRRSPSSEQLVSQSTSSQMLQQITRF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagtgcagcttcgtcgcctaaacccatcccttctccaaatccgatggaccca
tcaccaccaccgccatcacaacaagcccaaccacaatcacaacaactaccaccaacggtg
aactcaaatacgacagctctaactccaccacaaccacaagcacaaacacctacaccaaac
atgtcaaatttagctcaaaatccacaaatctcttctccttctattgaccagcaaatttcc
tcgcctcctctttcttctcaacagcaacagcaaccaactgtacagcaacagcagcaacaa
caacaaacgcagcagcaattgcagcaacaaaatgtcgcagctatgccaagctatcaaatt
ccacaaacccttcaaagatctccttctttgtctcgtttaagccaaattaaccaacagcag
cagcagcaaaatcaatatggtagcgttttgaggcagcagcagcagcagggattatatggg
caagtgaattttggtgggtcggggtcaattcaacagaatttacagcagaattcacaaaat
cagcaaatgggtggcgccaacttgtcgcgttctgcacttcttgggcagaacgggcacctg
cccattctgcccgggccagcagctgtggcagctgcagctcagttgaacttgttggcctcg
ccgaggcagaaagctggcttagttcagggttcccaattccatcctggcacttcaccaggg
cagccattgcagggaatgcaagcaatgggagtgatggggtcactcaatttaagctcacaa
ctaaggcctaatagtgctcttgcttatgctcaacaacggattaatgctggacaaatgaga
cagcaactggcacaacaaaattcactcacctcatctcaggttccaaacctatcaaggacg
tcgtcactggcatttatgaaccctcaactgtctgggctggttccgaatgcacagccaggt
atgatgcagaattctctgtcacagcagcagtggctgaagcaaatgccagcaatatctggt
cctgcttcaccttcattccgtcttcaacatcaaaggcaaacacaggtcctcttgccgcag
caactggtatcttcccctcagttgcatttaaatgcacaacaattatctcagctggtacag
cagcagccatcaatggggcaccaacaactgcaacagcagcagcagcagcagcagcaacaa
caacaacagccgcagcaacaacagcaaatacaacaacaacaacagctacaaccacagcag
caattgcaacaacaattgcctttgcatcagcaacagcaacaacaatcaccaaggatgcaa
gggcccactggtcagaagtctcttagtttgacaggatcacaaccagatgcaacagcatct
ggtacaactacaccagggggaagctcaagccaaggaacggaggcaactaatcaactactt
ggaaagagaaaaatacaggacttggtttcacaggtggattcacagggaaagctagatcct
gaagttgaagatcttctcttggagattgctgatgactttattgattctgtgactacattt
gcatgcagtttggccaagcatcgaaaatcttcaacattagagtcgaaggatttgttgcta
cacttggagaagaactggcagctgactattcctggattttcaactgaagaaagaaatttc
caaagaaaacctttatcaagtgatctccacaagaagcgtcttgatatgatttgtgcattg
agggagtcttcacacatggaaacaaataaccataatcctaaagaaatgattagacaaggt
ctcggcaaccccgttgttactaaccacctgataagacgttcaccaagttcagagcagttg
gtttcccagtcaaccagttctcaaatgctgcagcagatcacacgattttaa
DBGET
integrated database retrieval system
