Jatropha curcas (Barbados nut): 105631625
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Entry
105631625 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X3
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105631625
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
jcu01001
]
105631625
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105631625
03036 Chromosome and associated proteins [BR:
jcu03036
]
105631625
Enzymes [BR:
jcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
105631625
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105631625
Protein kinases [BR:
jcu01001
]
Serine/threonine kinases: Other
TAF1 family
105631625
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105631625
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
105631625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
HTH_3
Motif
Other DBs
NCBI-GeneID:
105631625
NCBI-ProteinID:
XP_012069188
UniProt:
A0A067LA06
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MGGYESGGASQDARDEDDDEEYEEVGGGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLGA
LADKLGPSLTDIDLSVKSPHASADAAEQDYDAKAEDAVDYEDIDEQYEGPEIQAASEEDF
LLPKKEYFSSEVSLATLEQKTSVFDDENYDEEEETEREDVVVEKKLEVQDQQDVAVVLAG
ETSPRDGIQLDSLDAENLDDGLEDFEEEIADAMEGPPDDQGSTPLPILCIEDGMVILRFS
EIFGIHEPLKKAEKRGHRYSINKERYKSMDVSDVVEEDEEAFLKGSSQVFQLHSYVNQYD
VSVFSGDILESGKFGAKQGSIQDEKQKRSSCTSSEPMNKDLSINLASGWQSPLCSKFYPL
DQQDWEDRILWDNSPVSNNSIASCELSGPDLGNSFIKEMEQASSPQSVHLELPMNPDEQA
HNIFLHGSPVVVESFDSGDSSGQLDLSSSESRSHPQLLRLESQLEGEKYHDVGGRRENNA
VEIVQCDAVRRFSKLTLQNKDMMEGSWLDEIIWEPNKDHMKPKLILDLQDEQMLFEVLDK
NDSKHLQLHAGAMIVTRSLKPRVSPDLSGHGYNSGWQFNIANDKFYMNRKISQQLQSNSG
KRIAYGTKVHHSAPAIKLQTMKLKLSNKDLANFHRPKALWYPHDNEVAVKEQKKLPTQGP
MKIILKSLGGKGSKLHVDAEETVSSVKAKASKKLDFKPSEMVKIFYLGKELEDQKSLAAQ
NVQPNSLLHLVRTKIHLLPRAQRIPGENKSLRPPGAFKKKSDLSVKDGHIFLMEYCEERP
LLLSNIGMGANLCTYYQKSSTGDQSGISLRNGNSSLGNVVVLEPTDKSPFLGDIKAGCSQ
SALVTNMYKAPIFPHKVASTDYLLVRSAKGKLSIRRIDQIAVVGQQEPLMEVFSPGSKNL
QSYITNRLLLHVYREFRAAEKRGIVPWIRADELSTQFPNLSETMLRKKMKECAVLRRDAN
GHLFWSKKRDFIIPSEEDLKKLVLPENVCAYESMQAGLYRLKHLGITRLTNPTNVSTAMS
QLPDEAIALAAASHIERELQITPWSLSSNFVACTNQDRENIERLEITGVGDPSGRGLGFS
YVRAATKATVSNAMVKKKAAAGRGGSTVTGTDADLRRLSMEAAREVLLKFNVPEEQIAKQ
TRWHRIATIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQS
LSAVDGDENESDSEANSDLDSFAGDLENLLDAEECEGDESNYESKHDKADGMKGLKMRGR
ASQAQAEEEIEDEAAEAAELCRLLMDDDEAEQKKKKKTKIPGVGAGLAPRSKPNFVANAE
RIKKTNKVHPNDSCLPKESSIRDSKEVNVETLFAKRKMSEKLKAIKKNGTSDSTISTIKT
KVKISGEGPKTFKEKKPSRETFVCGACGQLGHMRTNKNCPKYGEESEAQVETADLEKVSG
KSNSLDPSSKSMQKLQKKKSMPKGTVKVQPSESEKSSLKAKPLPVKFKCGSTEKLSDKPA
DGATKSSDWPVTSDARPDSSDVETGSKPIAKVSKIKISNKAKTEDVQVELHKPSIVIRPP
MDTDRSQIESHKPSIVIRPPSNTERDHVESHKPSIVIRPPAVKDREQAHKKIVIKQPKEI
VDLDQVSQDGSTGFEFRKIKRIAELSGIENRRKSQILHFPGESAKRKSREEGRWWEEEEK
RRNTERLREGRARRIYGEETRGVEEQGLAELRRYEEAVRREREEEEQQKAKKKKKKKKKP
EISDDYLDDYRASRRMPERDRGAKRRPVVELGRFGAEYTPATKRRRGGEVGLANILEHIV
DTLKDKLDISYLFLKPVSKKEAPDYLDIIKHPMDLSTIRDKVRKMEYKHREDFRHDVWQI
TYNAHLYNDRRNPGIPPLADQLLELCDYLLKEQSHSLSEAEAGIESREN
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgggtggttatgagtcaggtggtgcatcccaggatgctcgtgatgaagatgatgatgag
gaatatgaagaggttggtgggggtaacaggttattgggatttatgtttgggaatgtcgac
aactctggtgatcttgatgttgattatctcgatgaggatgcgaaggagcatcttggtgca
ctggctgacaagttaggcccatcattgacagatatagatttgtctgtgaaatcaccacac
gcatcagctgatgctgcagaacaagattatgatgcgaaggctgaagatgcagttgattat
gaagatattgatgagcagtatgagggaccagagattcaagcagccagtgaggaggatttt
ttgttgcccaaaaaggagtatttttcttctgaagtttctctggccacattggagcagaaa
acttctgtttttgatgatgaaaattatgatgaggaagaggaaaccgaaagggaagatgtg
gttgtggaaaaaaagcttgaagttcaagatcagcaggatgttgcagtagttctagcaggg
gaaacatcaccacgcgatggtatacagcttgactccctggatgctgaaaatctggatgat
ggcttggaagatttcgaggaagagatagcagatgctatggaggggcctccagatgatcaa
ggttccacaccactgcctattttgtgtatagaagatggtatggtgattttacggttctct
gaaatatttggtattcacgagcccttgaagaaagcggaaaaaagaggccatagatattcc
attaacaaggagagatataaatctatggatgtttctgatgttgttgaagaagatgaggaa
gcatttttaaagggctctagtcaagtgtttcagttgcactcttatgtaaatcaatatgat
gtctcggtgtttagtggtgatatcttagaatctggaaaatttggtgctaagcaaggatca
attcaagatgagaaacaaaaaagaagctcttgtactagttctgagccaatgaacaaagat
ttatccataaatcttgcctcgggatggcaatcaccattatgttcaaaattctatcctctc
gatcagcaggattgggaagatagaattctctgggacaattctcctgttagcaataattct
atagcgagttgtgagttgtctggacctgatttggggaattcatttataaaggaaatggaa
caagcaagctcgccacagagtgttcatttggagctccctatgaatccagatgagcaagct
cataacattttcctgcatggttctcctgttgttgtcgagtcatttgactctggagattct
tcaggacaactggacctttcatcatcagaaagcagatcccatccacaacttttgaggtta
gagtctcagttagaaggggagaaatatcatgatgttggtggtagaagagagaataatgct
gtggagattgtccaatgtgatgctgtaaggcgtttcagcaaactcacattgcaaaacaaa
gacatgatggaaggttcttggttagatgagataatatgggaacccaataaagatcatatg
aaacctaagctcattcttgatcttcaagacgagcagatgctttttgaagttttggataaa
aatgatagtaaacatcttcagcttcatgcaggggcaatgatagtgacccggtctctaaag
cctagggtttcacctgatctatctggtcatggatataattctggttggcaattcaacatt
gctaatgacaagttctacatgaacagaaaaatttctcagcagttgcaatcaaattctggc
aaacgaatcgcctatggtaccaaagttcatcattcagcacctgccattaagctgcagaca
atgaaattgaaattaagcaataaagatttagctaattttcatcgaccaaaagctttgtgg
tatcctcatgacaatgaggtggctgtcaaagaacaaaagaagctgcctacgcaaggaccc
atgaaaatcatattaaagagcttgggaggtaaaggaagtaaattacatgtggatgctgag
gaaactgtctcttctgttaaagcaaaggcttcaaaaaagctagatttcaagccttcagaa
atggtgaagatcttttatttggggaaggagcttgaggatcagaaatctctcgctgcccaa
aatgttcagccaaactcattgcttcaccttgttcgtaccaaaattcatttgttgccaagg
gcacaaaggattcctggggagaacaaatctttgcgccctcctggggcatttaagaagaaa
tcagacctttcagtaaaagatggccacatctttctgatggaatattgtgaggaaagacct
ttattattgagcaatattggcatgggtgcaaacctctgcacttactatcagaagtcaagc
actggtgatcaatctggcatctcattgcgcaatggaaacagcagcttgggaaatgttgta
gtattagagcctactgataaatctccttttcttggagatataaaagctggttgcagccaa
tcagcgcttgtaacaaacatgtataaagcacccattttcccccataaggtagcatccact
gattatttgttggttcgctcagcaaagggaaagctttccataaggcgcattgaccaaatt
gctgtcgttgggcaacaggagccccttatggaggtattttctcctgggtcgaagaatctt
cagtcatatatcacaaataggttattgttgcatgtataccgcgagtttcgagcagcagaa
aagcgtggcatagttccttggatacgtgctgatgagctgtcaactcagtttccaaacctt
tcagaaaccatgttgcggaagaaaatgaaggaatgcgctgtattgcggagggatgcaaat
ggacatctgttttggtccaagaaacgtgatttcatcattccatctgaagaggatttgaag
aagttggtcttaccagaaaatgtttgtgcttatgaaagcatgcaagcaggtctctaccgt
ctcaaacacttaggaattacaaggctaacaaacccaactaatgtttcaactgcaatgagt
caactccctgatgaagcaatagctttggctgctgcatcacacatagagagggaattgcag
ataactccatggagcctgagcagcaattttgttgcttgtacaaaccaggatagagaaaat
attgagcgtcttgagattactggagttggtgatccatctggtcggggcctgggatttagt
tatgtccgtgctgctacaaaggcaacagtgtcaaatgcaatggtgaagaaaaaagcagct
gctggtcgaggaggttccactgttactgggacagatgctgaccttcgtagattaagtatg
gaggctgcacgggaggttcttctcaagttcaatgttcctgaggaacagattgcaaaacag
actaggtggcatcgtattgctacgatacgaaagctttcaagtgaacaggcagcatcaggg
gtaaaggttgatccaacaactattagcaagtatgcgcgtggccaaaggatgtcctttctt
cagctacagcaacagacaagagaaaaatgtcaagaaatctgggatcgtcaagtgcagtct
ctttcagcagtggatggtgatgaaaatgagagtgattctgaagcaaatagtgatctagat
tcctttgctggagacctggaaaacttgcttgatgcagaggaatgtgaaggggatgagagt
aattacgagtccaagcatgacaaagcagatggcatgaaggggctaaaaatgagaggacgt
gcttcacaggctcaggcagaagaagaaattgaagatgaagctgccgaggcagcagaatta
tgcagattgctcatggatgatgatgaggctgagcagaagaagaagaaaaaaactaaaatt
cctggggttggggcaggattggcacctcgttcaaaaccaaattttgttgctaatgcagaa
cgaattaagaaaacaaacaaagtccatcctaatgattcctgtcttccaaaagagagcagc
attagagactcaaaggaggtaaatgtggaaactttatttgctaaaaggaagatgtctgag
aagttgaaagctattaaaaagaatggtacttcagattcaactataagtacaattaaaaca
aaagtcaaaatatcgggtgaaggacccaagacttttaaggagaaaaaaccatcaagagag
acttttgtctgcggagcatgtggtcagcttggacacatgaggaccaacaagaattgcccc
aagtatggagaagagtctgaagcacaggttgaaactgcagatttggaaaaagtttctgga
aaatcaaattctcttgatccctcaagtaagtctatgcagaagttgcaaaagaaaaagtcc
atgccaaaaggcacagtcaaagtccaaccttctgaaagtgagaaatctagtttgaaggca
aaacctctgccagttaagtttaagtgcggctccactgagaaactatctgataaacctgct
gatggagctaccaaaagttctgactggcccgtcacttctgatgcccggcctgacagttct
gatgtggaaactgggagtaagcctattgctaaggttagtaagataaaaatatccaacaaa
gcaaaaaccgaagatgtacaagttgaattgcacaaaccttccattgtgatacgtcctcca
atggatactgatagaagccaaattgaatctcataagccgtctattgttattcggccacca
tcaaacacagagagagatcatgttgaatctcacaagccctctattgtaatacgtccaccg
gcagtaaaagatagggagcaggctcacaagaaaatagttatcaagcagcccaaagagatc
gttgatcttgaccaggtcagtcaggatggaagcactgggtttgagttccgaaaaattaaa
agaatagctgaattgtcaggtattgagaatcgaaggaagtcacagatcttgcattttcct
ggagagtcagcaaagaggaaatctagagaggaaggaagatggtgggaagaggaagagaaa
aggagaaatacagaaagattaagagaagggagagcaagaaggatttatggggaagaaaca
agaggagttgaggaacaaggacttgctgagcttaggcgatatgaagaagccgtcagaagg
gagagagaggaagaagagcagcagaaagccaagaaaaagaaaaagaagaagaaaaagcct
gaaattagtgatgactacttggacgactacagggcaagcagaaggatgccagaaagagat
cggggtgcaaaaagaaggccagttgttgaattggggaggtttggtgcagaatatacccct
gcaacaaagcgtcgtagaggtggagaggttggccttgcaaatatcttagaacacattgtg
gacacccttaaagataagttggatatatcctatctttttctaaaaccagtatcgaagaag
gaagctcctgactacttggacatcataaagcaccccatggatctatcaacaatcagagat
aaagtaagaaagatggaatataagcaccgcgaggatttcagacacgatgtatggcagatt
acatataatgctcacttatacaacgacaggcggaatcctggtattcctcccttagcagat
cagcttttggaactttgtgactatctgctgaaggaacaaagccatagcttatcggaagct
gaagccgggattgaatctagggaaaattaa
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integrated database retrieval system
