Jatropha curcas (Barbados nut): 105631760
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Entry
105631760 CDS
T03922
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105631760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105631760
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105631760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
105631760
NCBI-ProteinID:
XP_012069319
UniProt:
A0A067L7G8
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MSFDLMLKPSCSGCGSTQELYGSNCKHMTLCLTCGKTMAENRGKCYDCGATVTRLIREYN
VRASSSSDKNYFIGRFVTGLPSFSKKKSAENKWSLHKDGLQGRQLTDALREKYRNKPWML
EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGTAGGKGGRKKPAGDEEEGNVSDR
AEEDEEEEAARKNRLGLNKRSGDDDEEGLRGGDHDMDDDDSEKGDDWEHEEIFTDDDEAV
GNDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKAAGLNDSDAED
DDDDEDMEEDVSPVLAPKQKDAPKEEPVDNSPAKPMPSSSAKGTPSNSKSAKGKRKLSGD
DAKTSSGAPQKKVKAENDLKPTVKEEHAPTAKSSPTPKGATSSLKPGSTSPVTEEEIRAV
LLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSNYVVLRER
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatcttatgttgaagccatcatgtagtggatgtggatcgacccaagagtta
tatggaagcaactgcaaacacatgaccctgtgcttgacttgtggcaaaaccatggctgag
aaccgtgggaaatgctatgattgtggtgctacagtcactcgtttgattcgagagtataat
gttcgagcaagttctagcagtgacaaaaattactttattggtagatttgtgactgggcta
cccagtttttcaaagaagaaaagtgccgagaacaaatggtctctccataaagatggactt
caaggacgtcaacttacagatgctttgcgggagaaatacaggaataagccttggatgttg
gaggatgaaacgggtcagtctcagtaccaaggccatcttgaaggttcacaatcagcaact
tactacctattgatattgcaggggaaagagtttgttgctattcctgctggttcttggtat
aactttaacaaggttgctcagtataagcaacttaccttggaggaagcagaagagaagatg
aagaacaggagaaagactgcagatggataccaaaggtggatgatgaaagctgcaaataat
ggtgctgcagcatttggcgaagttgaaaaatttgatgataaggaaagtggaactgctggt
ggaaaaggtggccgtaaaaaaccagctggtgatgaagaagaaggcaacgtgtctgacagg
gcggaggaagatgaagaagaggaggcagcaaggaaaaatagacttggactaaacaaacgc
agtggtgatgatgatgaggaaggtctaaggggaggagatcatgatatggatgatgatgat
agtgagaagggtgatgattgggagcatgaagaaattttcactgatgatgatgaagctgtt
ggtaatgatcctgaggaacgggaagatttggctcctgaggttcctgctcctccagaaatc
aagcaggatgaagaagatgaagatgaagagaatgaggaaggtggactgagtaaatctggt
aaagagttgaagaagcttcttgggaaagctgctggactgaatgattcagatgcagaagat
gacgatgatgatgaggatatggaagaagatgtttctcctgtcttggctccaaagcagaag
gatgcacctaaggaggaacctgttgacaacagtcctgcaaaaccaatgccttctagttct
gctaagggaaccccgtctaattccaagtcagcaaagggaaaaaggaaattaagtggtgat
gatgcaaaaacatctagtggtgcacctcaaaagaaagtgaaggcggaaaatgacttaaaa
cctactgtgaaagaagaacatgcgcctactgctaaaagtagcccgactcctaaaggggca
acttcatcattgaaaccaggttcaacatcacctgtcactgaagaagagatcagggctgtt
ttgttgcaaaatgggccagtgactacacaggatcttgttgctcggtttaaatcgcgactg
aaaggttctgaggataagaaggcttttgcagaaatcctgagaagaatatctaaaattcag
aagaccagtggatctaactatgttgttttaagagagagatag
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