Jatropha curcas (Barbados nut): 105632460
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Entry
105632460 CDS
T03922
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105632460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105632460
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105632460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Utp13
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_like
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_NOL10_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
105632460
NCBI-ProteinID:
XP_012070233
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MSSMQIKKSYRSVPSLQQFYTGGPFVVASDGSFIACACGEAIKIVDSANASIRGSIEGDT
EAVTALALGPDDKLLFSAGHSRQIRVWDLTTMKCVRSWKGHDGPVMGMACHGSGGLLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVTSITFHPDTNRMLLFSGSDDTTVRVWDLLAKKC
IATLEKHFSTVTSLAVSEDGWTLLSVGRDKVVILWDLHANVCKKMIPAYEMLEALCVIPS
RTQFSSFLGSHNQQSEKNKNESSAIHFITVGERGIVRIWNSERAVCLYEQKSSDVTVMSD
TDEAKRGFTAAAILPLDQGLLCVTADQQFLFYLPVEHPEEKFKLALHKRLIGYNEEILDM
RFLGEEENFLAVATNLEQIRVYDLDSMSCSYVLAGHSEIVLCLDTCVSKSGRTLIVTGSK
DNTVRLWDSESRNCIGVGTGHMGGVGAVAFSKKWKNFFVSGSSDHTIKVWSLDGVSDDVD
HLVNLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVFVVALKGHKRGI
WSVEFSPVDQCVITASGDKTIKIWAIADGSCLKTFEGHTSSVLRASFLTRGTQFISCGAD
GLVKLWTLKTNECIATYDQHEDKVWALAVGKKTEMFATGGGDAVVNLWYDSTASDKEEAF
RKEEEGVLKGQELENAVLDADYTKAIQIAFELRRPHKLLELFADLCRKREADYQVEKALH
ALGKEELHLLFEYVREWNTKPKLCHVAQYILFRVFNILPPTEILEIRGIGELLEGLIPYS
QRHFSRIDRLVRSTFLVDYTLNGMSVIEPNAQTAEPKDSSYASKNVNDNNSMLLDEQAEE
EQQQTPEVSKEKNNSKKRKSKKGRDGSHKKVKGSAYTSIAAIPLQP
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgatgcaaatcaagaagagttaccggagcgtgccgtcgttgcagcaattctac
accggaggaccgttcgtggtggcatctgatggctccttcattgcctgcgcttgtggagaa
gccattaagatcgtggattcggccaatgcttcaataaggggcagtatcgaaggtgacacg
gaggctgtcacggccctggcacttggtcctgatgataaattgctgttttctgccggccac
agcaggcaaattagagtatgggatttgaccactatgaaatgtgtgcgctcatggaagggg
cacgatggtcccgtaatgggaatggcttgccatgggtctggaggattacttgcaactgca
ggagctgataggaaagtccttgtttgggatgttgatggtggattctgcactcattacttc
aaaggccataaaggggttgtgacaagtatcacgtttcatcctgatacaaacagaatgctt
cttttctctggaagtgatgataccactgtacgagtttgggatcttctagccaagaagtgc
atagcaacattggaaaaacatttttcaacagtgacctctttggcagtatctgaagatgga
tggacattactcagtgttggaagagataaggtggtgatcttgtgggaccttcatgccaat
gtctgcaagaagatgattcctgcttatgagatgctggaagcgctgtgtgtaattccttcg
cggactcaattttcctcatttctgggatcacacaatcagcagagtgagaaaaataaaaat
gaatcatctgcaattcatttcattacagtcggtgaacgtgggattgtacggatatggaat
tctgaacgtgcagtttgcctttatgaacaaaagtcttcggatgttactgtcatgtcagac
actgatgaggcaaaaagaggcttcacagctgctgctatccttcctttagatcaaggattg
ctttgtgtgactgctgatcagcaatttctattttacttaccagttgaacaccctgaagag
aagttcaagttagcattgcacaaaagacttattgggtataatgaggagattcttgatatg
aggtttttgggtgaggaggaaaattttcttgctgttgctacaaatcttgaacagattcga
gtatatgacctggattctatgtcgtgctcctatgttttggcgggtcattctgaaattgta
ttgtgcctcgacacttgtgtgtcaaaatctggaaggacgcttatagtaacaggaagtaag
gacaatactgtaaggttgtgggattcagaaagcagaaattgcattggtgttggcacaggt
cacatgggaggtgttggagctgttgcattttcaaagaagtggaagaatttctttgttagt
ggtagcagtgatcatactatcaaggtatggagtttggatggtgtctcagacgatgtggat
catctcgttaatttgaaagcaaaagcagttgtagcagctcatgacaaggacataaattct
ctggctgttgcaccaaatgatagtttggtttgtagtggttcacaggaccggactgcttgt
gtatggaggcttccagatctcgtatttgttgttgcacttaaagggcataaaagaggaatt
tggtctgtagagttttcaccagttgatcaatgtgtcattacagcatctggggataaaacc
ataaagatatgggcaatagcagatgggtcttgcttaaaaacatttgaagggcacacatca
agtgtattaagagcatcatttcttacccgaggcacacaatttatttcatgtggtgctgat
ggtttggtaaagctatggactctaaaaacaaatgaatgcattgccacatatgatcaacac
gaggacaaggtttgggccctagctgttgggaaaaagacagaaatgtttgcaacaggtggc
ggggatgcggttgtcaatctgtggtatgactcaactgcttctgataaagaggaagctttc
cgtaaagaggaggaaggcgttttaaaaggtcaagaattggaaaatgctgtgttagatgct
gattacactaaagctatccaaatagcatttgaacttcgcagacctcataaacttcttgag
ttatttgctgatctttgcaggaagagggaagctgactatcaagtagagaaagctcttcat
gcgcttggcaaggaagaacttcatctactctttgagtatgttcgtgaatggaatacaaaa
ccaaagctttgtcatgttgcacaatatattctctttcgagttttcaacattcttcctcca
actgagattctcgagataagagggattggagaacttcttgaaggtcttatcccatattct
cagaggcacttcagcaggatagaccgacttgtaagaagcacatttttggtggactatact
ctgaacggaatgtcagttatcgagccaaatgctcaaactgctgaaccaaaggacagttct
tatgcatccaagaatgtaaatgataataacagcatgcttttagatgaacaagccgaggaa
gagcaacagcagactcctgaagtgtcaaaagagaagaataattccaagaaacggaaatca
aagaaaggtagagatggctcacataagaaagtgaagggttcagcttacacaagtatagcc
gcaattccattacagccatag
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