KEGG   Jatropha curcas (Barbados nut): 105632460
Entry
105632460         CDS       T03922                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105632460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:jcu03009]
    105632460
Ribosome biogenesis [BR:jcu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    105632460
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Utp13 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_like Beta-prop_Vps41 Cytochrom_D1 Beta-prop_NOL10_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 105632460
NCBI-ProteinID: XP_012070233
LinkDB
Position
Unknown
AA seq 886 aa
MSSMQIKKSYRSVPSLQQFYTGGPFVVASDGSFIACACGEAIKIVDSANASIRGSIEGDT
EAVTALALGPDDKLLFSAGHSRQIRVWDLTTMKCVRSWKGHDGPVMGMACHGSGGLLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVTSITFHPDTNRMLLFSGSDDTTVRVWDLLAKKC
IATLEKHFSTVTSLAVSEDGWTLLSVGRDKVVILWDLHANVCKKMIPAYEMLEALCVIPS
RTQFSSFLGSHNQQSEKNKNESSAIHFITVGERGIVRIWNSERAVCLYEQKSSDVTVMSD
TDEAKRGFTAAAILPLDQGLLCVTADQQFLFYLPVEHPEEKFKLALHKRLIGYNEEILDM
RFLGEEENFLAVATNLEQIRVYDLDSMSCSYVLAGHSEIVLCLDTCVSKSGRTLIVTGSK
DNTVRLWDSESRNCIGVGTGHMGGVGAVAFSKKWKNFFVSGSSDHTIKVWSLDGVSDDVD
HLVNLKAKAVVAAHDKDINSLAVAPNDSLVCSGSQDRTACVWRLPDLVFVVALKGHKRGI
WSVEFSPVDQCVITASGDKTIKIWAIADGSCLKTFEGHTSSVLRASFLTRGTQFISCGAD
GLVKLWTLKTNECIATYDQHEDKVWALAVGKKTEMFATGGGDAVVNLWYDSTASDKEEAF
RKEEEGVLKGQELENAVLDADYTKAIQIAFELRRPHKLLELFADLCRKREADYQVEKALH
ALGKEELHLLFEYVREWNTKPKLCHVAQYILFRVFNILPPTEILEIRGIGELLEGLIPYS
QRHFSRIDRLVRSTFLVDYTLNGMSVIEPNAQTAEPKDSSYASKNVNDNNSMLLDEQAEE
EQQQTPEVSKEKNNSKKRKSKKGRDGSHKKVKGSAYTSIAAIPLQP
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgtcgtcgatgcaaatcaagaagagttaccggagcgtgccgtcgttgcagcaattctac
accggaggaccgttcgtggtggcatctgatggctccttcattgcctgcgcttgtggagaa
gccattaagatcgtggattcggccaatgcttcaataaggggcagtatcgaaggtgacacg
gaggctgtcacggccctggcacttggtcctgatgataaattgctgttttctgccggccac
agcaggcaaattagagtatgggatttgaccactatgaaatgtgtgcgctcatggaagggg
cacgatggtcccgtaatgggaatggcttgccatgggtctggaggattacttgcaactgca
ggagctgataggaaagtccttgtttgggatgttgatggtggattctgcactcattacttc
aaaggccataaaggggttgtgacaagtatcacgtttcatcctgatacaaacagaatgctt
cttttctctggaagtgatgataccactgtacgagtttgggatcttctagccaagaagtgc
atagcaacattggaaaaacatttttcaacagtgacctctttggcagtatctgaagatgga
tggacattactcagtgttggaagagataaggtggtgatcttgtgggaccttcatgccaat
gtctgcaagaagatgattcctgcttatgagatgctggaagcgctgtgtgtaattccttcg
cggactcaattttcctcatttctgggatcacacaatcagcagagtgagaaaaataaaaat
gaatcatctgcaattcatttcattacagtcggtgaacgtgggattgtacggatatggaat
tctgaacgtgcagtttgcctttatgaacaaaagtcttcggatgttactgtcatgtcagac
actgatgaggcaaaaagaggcttcacagctgctgctatccttcctttagatcaaggattg
ctttgtgtgactgctgatcagcaatttctattttacttaccagttgaacaccctgaagag
aagttcaagttagcattgcacaaaagacttattgggtataatgaggagattcttgatatg
aggtttttgggtgaggaggaaaattttcttgctgttgctacaaatcttgaacagattcga
gtatatgacctggattctatgtcgtgctcctatgttttggcgggtcattctgaaattgta
ttgtgcctcgacacttgtgtgtcaaaatctggaaggacgcttatagtaacaggaagtaag
gacaatactgtaaggttgtgggattcagaaagcagaaattgcattggtgttggcacaggt
cacatgggaggtgttggagctgttgcattttcaaagaagtggaagaatttctttgttagt
ggtagcagtgatcatactatcaaggtatggagtttggatggtgtctcagacgatgtggat
catctcgttaatttgaaagcaaaagcagttgtagcagctcatgacaaggacataaattct
ctggctgttgcaccaaatgatagtttggtttgtagtggttcacaggaccggactgcttgt
gtatggaggcttccagatctcgtatttgttgttgcacttaaagggcataaaagaggaatt
tggtctgtagagttttcaccagttgatcaatgtgtcattacagcatctggggataaaacc
ataaagatatgggcaatagcagatgggtcttgcttaaaaacatttgaagggcacacatca
agtgtattaagagcatcatttcttacccgaggcacacaatttatttcatgtggtgctgat
ggtttggtaaagctatggactctaaaaacaaatgaatgcattgccacatatgatcaacac
gaggacaaggtttgggccctagctgttgggaaaaagacagaaatgtttgcaacaggtggc
ggggatgcggttgtcaatctgtggtatgactcaactgcttctgataaagaggaagctttc
cgtaaagaggaggaaggcgttttaaaaggtcaagaattggaaaatgctgtgttagatgct
gattacactaaagctatccaaatagcatttgaacttcgcagacctcataaacttcttgag
ttatttgctgatctttgcaggaagagggaagctgactatcaagtagagaaagctcttcat
gcgcttggcaaggaagaacttcatctactctttgagtatgttcgtgaatggaatacaaaa
ccaaagctttgtcatgttgcacaatatattctctttcgagttttcaacattcttcctcca
actgagattctcgagataagagggattggagaacttcttgaaggtcttatcccatattct
cagaggcacttcagcaggatagaccgacttgtaagaagcacatttttggtggactatact
ctgaacggaatgtcagttatcgagccaaatgctcaaactgctgaaccaaaggacagttct
tatgcatccaagaatgtaaatgataataacagcatgcttttagatgaacaagccgaggaa
gagcaacagcagactcctgaagtgtcaaaagagaagaataattccaagaaacggaaatca
aagaaaggtagagatggctcacataagaaagtgaagggttcagcttacacaagtatagcc
gcaattccattacagccatag

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