Jatropha curcas (Barbados nut): 105632541
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Entry
105632541 CDS
T03922
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105632541
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105632541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
TPR_Trm732_C
HEAT_2
HEAT_GCN1_C
HEAT_GCN1
HEAT_MROH2B_C
ResIII
ARM_TBCD_2nd
UTP20
CLASP_N
RIX1
Motif
Other DBs
NCBI-GeneID:
105632541
NCBI-ProteinID:
XP_037492536
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MAQQQSSRLNRLLTLLDTGSTQATRFTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWD
TRVAAAHAIGAIAQNVKHTSLPELFGYVETKMSEAGISGVVEDLVAWPDFHSKIVSSGSF
RSFDMNKVLEFGALLASGGQEYDIAIDNYKSPRERLARQKQNLRRRLGLDVCEQFMDVND
VIKDEDLVAQKLHSQGNGLEHGFYMPPSVHNIQRLVASMVPTVVSKRPSARELNLLKRKA
KINSKDQAKGWSEDGDTEVSFAQSTTPKASNQDSFNSNKVNTDEESFEHDGEGRWPFRGF
VEQLLLDMFDPVWEVRHGSVMALREILTHHGGSAGVFMPDLSLDGVLDELKDLDYSSTRK
REREIDLNMQVSADELQSHQKKPKLEDASSLSMSMLSTGCVGNFDISIKVEDGGWNIPSG
QVNGQVDASSVKMECDNYPDGIPCSSKVVESKGCYVDKVSVKSDVLSSLPENCELKNLVK
LSRYSWKKNSEYLQDFSIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGATFKYMHRTL
VFETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLPDLLDYVLPACKAGLEDPDDDV
RAVAADALIPTAASIVSLKGRTLHSIIMLLWDILLDLDDLSPSTSSVMNLLAEIYSQEDM
IPKMVSKEKQELDLNEVIHIDDAREGKDLQENPYMLSTLAPRLWPFMRHSITSVRYSAIR
TLERLLEASYKRNISEPSGASFWPSFILGDTLRIVFQNLLLESNEEILLCSERVWRLLVQ
CPVEDLEAAANSYMSSWIELATTPYGSALDSTKMFWPAALPRKSHFRAAAKMRAAKLEND
SSRNIDLDPGKEIILQERNGDASASTVKIIVGADVEMSVTNTRVITASALGIFASKLRDS
SLQYAIDPLQYALTSLSGVQRQVASMVLISWFKEIKSNDLPEVHFMPAFPSNVKSWLLDL
LSCSDPAFPTKDSVLPYSELSRTYVKMRNEASLLCRATESSGLPENTLSSIKVDMENLSA
DEAINFASKLPPLCGDSSGNESLGRNIVDDIESLKHRLLTTAGYLKCVQSNLHVTVSALV
AAAVVWMSELPARLNPIILPLMASIRREQEEILQHKAAEALAELIFHCIARKPSPNDKLV
KNICSLTCSDHSETPQAGLISSMETIDDQDFLSFGSNTGKQKSKVHSVAGGEDRSKVEGF
ISRRGSELALKYLCEKFGASLFDKLPKLWDCLTEILMPGSLADEQQITRRIEAVKDPQIL
INNIQVVRSITPMLNEALKPKLLTLLPCIFKCVRHSHVAVRLAASRCITSMAKSMTTNVM
AAVVESAIPMLGDATSVHARQGAGMLISLLVQGLGVELVPYAPLLVVPLLRCMSDVDHSV
RQCVTRSFAALVPLLPLARGLPPPCGLNEVLTSNTEDAQFLEQLLDNSHIDDYKLCTELR
VTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRTVNSSDDIQP
SLIVCPSTLVGHWAFEMEKYIDVSVISTLQYSGSVQDRMSLRDHFDKHNVIITSYDVVRK
DIDFLRQILWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMDLWSLFD
FLMPGFLGTDRQVRAQCLGSLLLSFTLYLKTIVLNLKHNASPKASTHVFQALQYLLKLCS
HPLLVVGEKMPEVLASQLSELLPPSSDVISELHKLHHSPKLVALQEILEECGIGIDASSS
ENAVSVGQHRVLIFAQHKALLDIIERDLFHSHMRNVTYLRLDGSVEPEKRFDIVKAFNSD
PTIDALLLTTHVGGLGLNLTSADTLIFMEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIM
RGTLEEKVMSLQKFKLSVANAVINAENASLKTMNTDQLLDLFASAEANTKGTTKRSDGNS
DGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLTQFLSKLNG
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagcaatcttcgcgtctcaatcgtttactgactctattagacactggttct
acccaagcgacaagatttactgcagctagacagattggggacattgcaaaatcacatcct
caggatttaagctctcttctgaagaaggtttctcaatatctccgcagtaaaaactgggat
acgagagttgctgctgcccatgcaattggggcaattgctcagaatgttaagcacacatca
ttgcctgaattatttggctacgtggaaacaaaaatgtccgaggctgggatttcaggtgtt
gttgaagatttggttgcttggcctgattttcattctaagatcgtgtcaagtggttcattt
agaagttttgatatgaacaaggtgttagagtttggtgccttgttggcatctgggggacag
gagtatgatattgcaattgataattacaagagtccaagggagcgattagctcggcagaaa
caaaatctccggcgcagactgggtttggatgtctgcgagcagtttatggatgtcaatgat
gtaattaaagatgaagaccttgttgcccaaaaattgcattcccaaggaaatgggttggag
catggattttatatgcctccatcagtacataatatccagcgactggttgcaagtatggtt
cccactgttgtatcaaaaagaccaagtgctagggaactgaacctcttaaagcgaaaggca
aaaattaattcaaaagaccaagcaaaaggttggtctgaggatggtgatacagaggtgtca
tttgctcagagtacaactccaaaggcctcaaatcaagattcatttaactctaacaaggta
aatactgacgaagaaagctttgagcatgatggtgaagggaggtggcctttccgtggtttt
gttgagcaacttctccttgacatgtttgaccccgtttgggaggttcgtcacggtagtgtc
atggcattgagagaaattttaacccatcatggtggttctgctggggtgttcatgcctgac
ttgagcttagatggtgttctagatgaattaaaagacctagattattcaagcacaaggaaa
cgagagagggaaattgatttgaatatgcaagtttcagcagatgagttgcagtcacatcag
aaaaagccaaagttagaagatgcatcctctttatcaatgtcaatgttgtctactggctgt
gtaggtaactttgacatcagtatcaaggttgaagatggtggatggaacatcccttcagga
caggttaatggtcaagttgatgctagttctgttaagatggagtgtgataattaccctgat
ggtataccttgttcatctaaggtggtggagtctaagggttgttatgtagataaggtttct
gtgaaatcagatgtacttagcagccttcctgaaaattgtgagctaaagaacttggttaaa
ctctctaggtattcgtggaagaaaaatagtgaatatcttcaagatttttctattcgtttc
ttgtgcatattatccttagaccgttttggagattatgtatctgaccaggtggttgctcct
gtacgggaaacttgtgcacaggcattgggtgccacatttaagtacatgcatcgcacttta
gtttttgaaacattaaatattctgcttcaaatgcagcgtagaccagaatgggaaattcgt
catggaagccttttgggtatcaagtacttggttgctgttcgtcaggagatgctgcctgat
ttgcttgactatgtattgcctgcttgtaaagctggtctggaggaccctgatgatgatgtt
cgggcagttgctgcagatgctttaatacctactgctgcttctatcgtctctctaaagggt
cggacattgcattccattattatgctactttgggatatattacttgatttagatgatcta
agtccatccactagcagtgtgatgaatctgttggcagaaatttattcccaggaagatatg
atccccaagatggtatcaaaagagaagcaggaattagacctgaatgaagtaattcatatt
gacgatgccagggaaggaaaagatttgcaggagaatccttacatgttgtcaacgttggca
ccgcgattatggccatttatgaggcacagtatcacatcagttcgatattcagctattcga
actctggagcgattacttgaagctagttataaaaggaatatttctgaaccatctggtgca
tcattttggccatcctttattttgggagatacccttcggattgtttttcagaatttactt
cttgaatcaaatgaagaaattttgttatgttcggagagggtttggaggctccttgttcag
tgccctgtggaggatttggaagctgctgcaaattcctacatgtcttcgtggattgaactt
gcaactactccatatggttcagcattagattctacgaagatgttttggcctgcggctcta
cctcggaagtctcactttcgagcagcagcaaaaatgagagctgcgaaacttgaaaatgac
tcttctagaaacattgatttagatccagggaaggaaattattctacaggaaagaaatggg
gatgcttctgctagcacagttaagatcattgttggtgctgatgttgaaatgtcagtcact
aatactcgagtgattacggcatcagcgttgggaatttttgcctctaagttgcgtgacagt
tctttacaatatgctattgatccgcttcagtatgctcttacctctttatctggagtacag
cggcaggttgcatccatggttctcatatcatggttcaaagaaatcaaaagcaatgacctc
cctgaagtgcattttatgcctgcctttcctagcaatgttaaaagttggctgttggatttg
ttatcctgttcggatcctgcatttcctacaaaagattcagttctgccatactctgagctc
tcaaggacttatgtgaagatgcgcaatgaggccagtctgctatgccgagccactgagtca
tctggcttgcctgagaatacattatcatctattaaagttgatatggagaacttgagtgct
gatgaagcaatcaattttgcttccaagttgcctccattatgtggtgatagttctgggaat
gaatctttgggacgaaacattgtggatgatattgaatcattgaagcaccgacttttgaca
actgcaggctatttgaaatgcgtccagagtaacttgcatgttactgtctctgctttagtt
gctgctgcagttgtctggatgtctgagcttcctgccagacttaacccaatcattttgcct
ctgatggcctcaatcagaagagaacaggaggaaatattgcagcacaaggctgctgaggca
cttgctgagctaatttttcattgtattgcacgtaagcctagtccaaatgataagctagtc
aagaatatttgtagtttgacatgttcggatcactctgagacccctcaagctggactaatc
agttccatggagactattgatgatcaagatttcctttcctttgggagtaatacaggaaaa
caaaagtccaaggttcattcggtagctggcggagaagacaggtcaaaagttgagggcttt
attagtagacggggttctgaacttgcattgaaatatttgtgcgagaaatttggtgcttcc
ttatttgacaagcttccaaaactatgggattgcctcactgaaattctgatgcctggaagt
cttgcagatgaacaacaaattacaagaaggattgaggctgtgaaggatcctcagatcttg
ataaataatattcaggtagtacgttccatcactccaatgctcaatgaagcattgaagcct
aagttgctcacacttctcccatgtattttcaaatgtgttcgccattctcatgttgcagtt
agattggctgcctctaggtgtattacttcaatggccaagtcaatgacaacaaatgttatg
gctgcagtagtcgagagtgcaattccaatgctaggggatgccacttctgttcatgccaga
caaggtgctggcatgcttattagtttgcttgttcagggattgggcgtggagttggttcca
tatgctcctttattagttgttcctcttcttcggtgcatgagtgatgttgatcactctgtc
aggcagtgtgtgacacgcagttttgctgcccttgttcctcttcttccattagcacgaggc
ctaccccctccttgtggattgaatgaggttctaacgagtaatacagaagatgcacagttt
ttggagcaactgcttgacaattcacatattgatgattacaagctttgcactgaattgagg
gtcacattaaggaggtatcaacaagaagggataaactggttggctttcttaaaacgtttc
aagctccacgggatcctttgtgatgatatgggacttggtaagacattacaggcatcagca
attgtggcatctgacattgctgagcgtcgcactgtgaatagcagtgatgacattcaacca
tctttaattgtttgtccatcaacacttgttggacattgggcctttgagatggagaagtac
attgatgtttctgtaataagtaccctgcaatattctggctctgttcaagatcgcatgtct
cttagagatcattttgataagcataatgtcatcatcacttcatatgatgtggttcgcaaa
gatattgatttccttaggcagatactgtggaattattgtattttagatgaagggcatata
attaagaatgcgaagtctaaaattactgctgcagtgaagcagttgaaagcccaacatcgc
ctgatacttagtggaactccaattcagaataacatcatggatctgtggtctctctttgac
tttttaatgccaggatttcttgggactgacagacaagtaagggctcaatgtctaggttcc
ttgcttcttagcttcacattgtatttaaagactattgtattaaatttaaaacataatgct
tcacccaaagcatctacacatgttttccaggcactgcaatacttgctaaaactttgcagt
catccattgcttgttgttggtgaaaagatgcctgaagtacttgcatctcaattgtcagaa
ctcctgcctccaagttctgatgtaatctctgaattgcataagctacaccactctccaaaa
ttagtagcactccaagagattctggaagagtgtggcataggtatagatgcttcaagttct
gagaatgctgtgagtgttgggcagcacagagttttgatatttgctcagcacaaggccctt
cttgacattattgaaagagatttatttcactcccatatgaggaatgtcacatacttgcgg
ctggatggatcagttgaaccagagaaacgttttgacattgttaaagctttcaattcagat
cctactattgatgccttgttgctcacaacgcatgttggtggccttggtttgaatctgaca
tctgccgatacccttattttcatggagcatgattggaatccaatgcgagatcatcaggcc
atggacagggcacatagattaggtcaaaagaaggttgtgaatgtccatcgcctcatcatg
cgtggcacgctcgaagagaaagttatgagtctccaaaagtttaaattatctgttgctaat
gccgttattaatgcagagaatgccagcctgaaaacaatgaatactgaccaattactcgat
ttatttgcatcagctgaagccaatacaaagggaactacgaagcgctcagatggcaactct
gatggagatcctaaattaatgggcaccggaaaaggcttaaaagccatccttgggggattg
gaggagctttgggatcaatcacagtacactgaagagtacaatctgacccagttcttatcc
aagctcaacgggtga
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integrated database retrieval system
