Jatropha curcas (Barbados nut): 105632665
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Entry
105632665 CDS
T03922
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E isoform X1
KO
K07466
replication factor A1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03030
DNA replication
jcu03420
Nucleotide excision repair
jcu03430
Mismatch repair
jcu03440
Homologous recombination
jcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105632665
03420 Nucleotide excision repair
105632665
03430 Mismatch repair
105632665
03440 Homologous recombination
105632665
03460 Fanconi anemia pathway
105632665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jcu03000
]
105632665
03032 DNA replication proteins [BR:
jcu03032
]
105632665
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105632665
Transcription factors [BR:
jcu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105632665
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105632665
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105632665
MMR (mismatch excision repair)
105632665
DSBR (double strand breaks repair)
HR (homologous recombination)
105632665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
RADX
CDC24_OB3
DUF223
NGO_1070-like
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
105632665
NCBI-ProteinID:
XP_012070498
UniProt:
A0A067KU82
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MNLSEGAIAKITSGGATAAELKPTLQVTELKQVQTKQPQQSDRFRLVLSDGSHLQQAMLG
TQINHLVKDGNLRAGSVVQLIQYTCTTVQGRMIIIILELVVVVEECALIGHPVSAQKSLG
PSQSSTDQPVNNPANPQSFGNSSLSGGMVGNPNLTVASAQNPRMNQLHGNSYSSNYDSGR
YGALNAPPSHVKAEPGAGLSGTTTINAAYNDQNAGFHNARPEISHPSGTSTCPSLPAYQQ
PPPMYSNRGPVARNEAPPRIMPISALNPYQGRWTIKARVTVKGELRHYNNPRGDGKVFSF
DLLDSDGGEIRVTCFNAVADQFYNQIEAGKVYLISRGSLRPAQKNFNHLHNDLEIFLEIG
SVIQPCFEDDNSIPRQQFHFRSISEVESMDNNSIVDIIGVVTSITPVASIMRKNGTETQK
RSLQLKDMSGRSVELTLWGNFCNAEGLRLQNICYSGCFPILAVKSCRVGDFNGKAVGTIS
TSQLFIDPDFPEGQRLKEWFEKEGRNIPSVCISREMSSVGRTDVPKTISQIKDEKLGTSE
KPDWITVGATVIFIKSDSFCYTACPIMAGDRPCSKKVTNNGDGKWRCEKCDQSMDECDYR
YILQFQIQDHTGITWVTAFQESGQEIMGISAKDLHFLKYEKQDDEGFSKIIRQVLFSKFQ
FKLKVKEETFSDEQRVKSTVVKAEKVNHSSHSKFLLDMIEKFKSGNYTLASNPESGYPNT
GANSTGIENVGGRQGGPVGSNQVGTNSYAARESGSLSNQVGQYGNQYSTRFPTHDLSCNS
CGATSHNSANCPSIMNAPRQSVGAGVYPNRGSSLAGGGGAAGECYKCHQIGHWARDCPGL
SSVTPAYGSSAISSGGRLGGISKQQVGGF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtcggagggagcgatagccaagataaccagcggcggagcaaccgccgcagaa
ctgaagccaacgttgcaagtgacggagctgaaacaggtgcaaacgaagcaaccccaacag
agtgaccgttttcggttggtgctatcagatgggtctcatttacaacaagccatgttaggc
actcagattaaccatttggttaaagatggaaacttgcgtgctggttctgttgttcagttg
attcagtatacttgcaccactgtccaaggccgcatgattataatcatcctggaattggtt
gttgtagttgaagagtgtgctctaattggacatccagtgtcagcacaaaagtctttgggg
ccttcacaatcctccactgaccagccagttaacaaccctgcaaatcctcaatcatttggt
aatagctcactttcaggtgggatggttggaaacccaaatttgactgtggcatctgcacaa
aaccctagaatgaatcagttacatggtaattcctattccagcaattatgactctggacga
tatggtgcattaaatgcacctccatcgcacgtgaaagcagaacctggtgcaggactttct
ggaaccactacaataaatgcagcctacaatgatcagaatgctggctttcacaatgctaga
cctgaaatttcacatccttctggcacttctacttgcccatctctgccagcatatcaacaa
ccacctcctatgtattctaatagaggaccagtggctaggaatgaagctccacccaggata
atgccgatttcagcactcaatccatatcagggtaggtggacaattaaggcaagggtgacg
gtaaaaggagagctgagacactacaataatccccgtggtgatggcaaagtgttctctttc
gatcttctcgactctgatggtggagaaattagagtaacctgctttaatgctgtagctgac
caattttacaaccagattgaagctgggaaagtttatttgatttccaggggaagtttaaga
cccgctcaaaagaatttcaaccaccttcacaatgatctagagatatttctggagatcggt
tcagtaattcaaccatgttttgaggatgacaactcaattccaaggcaacaatttcatttc
cgttccataagtgaagttgagagcatggataataacagtattgtggatataattggtgtg
gtgacttcaattactcctgtggcttcaataatgaggaaaaatggcacagaaactcagaag
agaagcctccagttgaaagacatgtcaggtcgtagtgttgaattaacgctttggggaaat
ttctgtaatgcagaaggactaaggctgcaaaatatttgctactctggctgttttcctatt
ctagctgtaaaatcttgtagagttggtgatttcaatgggaaggcagttgggactatttcc
acaagtcaactgtttatcgaccctgatttcccagagggtcagaggctaaaggaatggttt
gaaaaggaaggcaggaacatcccttctgtctgtatttcaagagaaatgtctagtgtgggt
aggacagacgttccaaaaactatttctcaaatcaaggatgagaaattagggacttctgag
aagccagattggatcactgttggagcaactgtgatcttcattaagtctgacagcttctgc
tatacagcttgccccatcatggctggcgaccgaccatgcagcaagaaggtcacaaataat
ggggatgggaagtggcggtgtgagaagtgtgatcagtctatggatgaatgtgactacaga
tacatactccagtttcagatacaggatcatactggcatcacatgggtgaccgcgtttcaa
gagagtggccaggagattatgggcatatctgcaaaagatctgcactttttgaaatatgaa
aagcaagatgatgagggtttttcaaaaattattcgacaagttctgtttagtaaatttcag
ttcaagttgaaagtaaaggaggaaacgtttagtgatgaacagcgtgtaaagtccactgtg
gtcaaagcagaaaaggtgaatcattcatctcattctaagtttcttttagatatgattgaa
aaattcaaatcagggaattacacacttgcttccaacccagaatctggttatcctaatact
ggagcaaatagcactggaattgaaaatgttggaggtagacaaggtggacctgtaggatct
aatcaagtgggcactaacagctatgcagctagagaatctggttcactgtcgaaccaagtg
ggtcagtacggaaaccagtacagcactaggtttcctacacatgatctgtcatgtaacagc
tgtggtgctacaagtcacaactctgcaaattgccctagtattatgaatgctccaaggcag
tctgtgggggctggggtctatcctaatagaggatcttctttggctggcggtggtggtgct
gcaggtgaatgctataaatgccatcaaatagggcattgggcgagagactgccctggcctt
agcagtgttactccagcttatggcagctctgccatttcctcgggtgggaggttgggtggt
atttcaaagcaacaggttggtggcttctaa
DBGET
integrated database retrieval system
