Jatropha curcas (Barbados nut): 105632997
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Entry
105632997 CDS
T03922
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105632997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105632997
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105632997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
105632997
NCBI-ProteinID:
XP_037494476
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MANLPQSLSMNAPFGGPSASTPTAAGAPPNKDRKMASAEHLVLDLSNPDLRENALLELSK
KETLFQDLETPIVWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASH
PDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEI
IPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQ
PSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNV
GVNRVPGLQAGGGFDHMLVN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgcctcagtctctctccatgaatgctccttttggtggccccagtgcctcc
actcctaccgccgccggtgcaccgcctaacaaagaccgaaaaatggcgtcagcagagcat
ttggtgcttgacctaagtaatccagatcttcgagaaaacgcccttcttgagctctctaag
aaagagacattatttcaagatttggagactcccattgtttggaattcttttggtactatt
gctgcacttttacaggagatagtttctatatatcctgttttatctccaccaaacctctct
cccgcacaatcaaaccgagtttgcaatgctcttgctcttcttcagtgtgtagcctctcat
ccagacacaaggatgttgttcctcaatgctcatatacccttgtatctttaccctttcctt
aatacgactagcaagtcaaggccttttgagtacttgaggctgaccagcttaggtgtcatt
ggtgcccttgtgaaggttgatgacactgaggttattagtttccttctctcaactgaaata
attccattgtgcctgcgtaccatggagatgggtagcgaattgtcaaaaacagttgcaaca
tttattgttcaaaaaatcttgttggatgatgtgggcttggattatatttgtactacagca
gaacggttttttgcagttggtcgagttttgggcaacatggttgcagcactggccgaacaa
ccctcatctcggttgttaaaacatattattcgatgttatcttcgactgtcagataatcct
agggcttgtgacgcattaagaagttgcctgccagacatgctacgagatgccaccttcagt
agttgccttcgtgaagatccaacaactaggcgatggctgcagcagttgcttcacaatgta
ggagtgaatcgggttccagggcttcaggctggtgggggttttgatcacatgctcgtgaac
taa
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