Jatropha curcas (Barbados nut): 105633031
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Entry
105633031 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X3
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105633031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105633031
03036 Chromosome and associated proteins [BR:
jcu03036
]
105633031
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105633031
Coactivators
SAGA/TFTC/STAGA complex
105633031
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105633031
STAGA complex
105633031
TFTC complex
105633031
SAGA complex
105633031
SLIK complex
105633031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
105633031
NCBI-ProteinID:
XP_012070930
UniProt:
A0A067KSX9
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSIVPKEAIEVIAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTTLTAED
VDSALSLRNVEPVYGFASGDPLRFKKAAGHKDLYYIDDKDVEFKDVIEAPLPKAPLDTSL
TVHWLAIEGVQPAIPENAPVEAVAASSDSKKSEYKEDGLPVDVKLPVRHVLSRELQLYFD
KITELIMRKSDSIIFKQALVSLATDSGLHPLLPYFTYLISDEVSRNLNNFSVLFALMRVT
RSLLHNPHIHVEPYLHQLMPSIITCLVAKRLGNRFSDNHWELRNFTADLVASICKRFGHV
YHNLQLRVTRTLLHAFLDPTKSLTQHYGAVQGLAALGPHVVRLLILPNLEPYLLLLEPEM
LLEKQKNEIKRLEAWRVYGALMRAAGLCMYDRLKTLPGLLRPSTRSVWKSNGRVMTTMPN
KRKANTDNLMQQPPLKKLATDGAIGVMNSMQVDMQGATSGYATAVGASSTTASLMSQQLP
NENMSGRDVGGRALKTSTVLAQAWKDMDAGHLLSLPYELFGESMFCFTPKTELSLFL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagtgccaaaggaagcaatcgaggtaattgcacagagcattggaatcaccaat
ttgtcccctgatgttgcccttgctctcgctcctgatgtcgaataccgagttcgcgagatt
atgcaggaagctattaaatgcatgcggcattcgagaagaactactttgacagcagaagat
gttgatagtgctcttagcttaagaaatgttgagccagtatatgggtttgcttctggagat
ccattgcggttcaagaaagcagcgggacataaggatctgtactacattgatgacaaggat
gtcgaatttaaagatgtgattgaagctcctttaccaaaagcacctcttgatacgtccctc
acagttcactggctggcaattgaaggagtccaacctgcaattccggagaatgctcctgtt
gaagcagttgcagcatcttctgacagtaaaaagtctgaatataaggaagatggccttccg
gtcgatgtaaaattacctgtcaggcatgtattatcaagggaacttcagctgtattttgac
aaaatcacagagctcatcatgaggaagtcagattccatcatcttcaaacaagctttggtt
agcttggcaacagactctggcctccatcctttacttccttatttcacatacttgatttct
gatgaggtctcacgaaatttgaataatttttctgttctgtttgccttgatgcgcgttact
cgaagccttcttcataatccacatatacatgtagaaccttatctacaccaattgatgcca
tctataattacctgcctagttgctaaaaggttggggaacagattttctgacaatcattgg
gagcttaggaacttcactgcagacctggttgcttcaatatgcaaaaggtttggccatgtt
taccacaatttacagctacgtgtcacaaggactctacttcatgcattcttggacccaacg
aaatcattgactcaacattatggtgcagttcaaggattagcagctttgggaccacatgtg
gttcgtcttctaatactgccaaatctagaaccgtatttgctacttcttgaaccagaaatg
cttcttgagaagcaaaagaatgagataaagaggcttgaagcttggcgtgtttatggggcc
ttgatgcgtgctgctggcctatgtatgtatgatcggcttaaaacattacctggtttacta
aggccttcaacacgttctgtctggaagagcaatggaagagttatgactacaatgccaaat
aaacgaaaagcaaacacagacaacttgatgcagcaaccaccactcaagaaactagcaaca
gatggtgcaatcggtgtaatgaactccatgcaagtcgacatgcaaggggcaacaagtgga
tacgccacagctgttggagcttctagcactactgcgtcgttaatgtctcaacagttgcct
aatgaaaacatgtcaggaagggatgttggaggtcgggcattgaagacatcaacagtgctt
gctcaggcttggaaggacatggatgcaggacatttattgtcgttgccatatgaacttttt
ggtgaaagtatgttctgctttacccccaaaaccgagttgtccctttttttgtaa
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