Jatropha curcas (Barbados nut): 105633088
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Entry
105633088 CDS
T03922
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105633088
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105633088
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105633088
NCBI-ProteinID:
XP_012071011
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All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MSASFLISIAIISLATSISCKHTLTQISEATEWSSTKRKLDQESCRNGNPIDDCWRCDSE
WESNRKMLADCAIGFGRNAIGGRDGEFYVVTDSENDDPINPIPGTLRYGVIQEEPLWIIF
DKDMVIELNEELMMNSYKTIDGRGYNIQIAGGPCITIQNVSNIIIHNIYIRDCVPGGNTV
VRDTPNHAGFRGISDGDGISIFGSREVWIDHCTLANCRDGLIDVVYGSTSITISNNYMFH
HNEAMLMGHSDDFLADKIMQVTIAFNYFGEGLTQRMPRCRHGYFHIVNNIYTGWEMYAIG
GSANPTINSQGNVFIASDNKGTKEVTKREILPEDEQWKSWNWRSDGDIMLNGAFFTPSGE
KGPESYIKASSMVARPASILLSNSSPSAGALYCQRGKQC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctcatttctaatctctatagccattatctcacttgctacttccatatcttgt
aagcatacactgacccaaatatcagaagcaactgagtggagctcaacaaaaaggaagcta
gatcaagagtcatgcagaaacggtaacccaatcgacgattgttggagatgtgactcagaa
tgggaaagtaaccggaaaatgctggctgactgcgcaattgggtttggacgcaatgcaata
ggtggaagagatggtgagttttatgtggtcacagattctgaaaatgatgatcctataaat
ccaattcctggcacacttcgctatggtgtcatccaagaagaacccctatggatcatcttt
gataaagacatggtcatcgagctaaatgaagaacttatgatgaactcatacaagacaata
gatggaagagggtataacatccagatagcaggtggaccatgcataactattcaaaatgtg
agcaacattatcatacataacatctacatacgggactgtgtaccaggtggaaatacagtg
gtgagggacacaccaaaccatgccggctttagaggcatctcagatggtgacggcatatcg
atatttggatctagggaagtgtggattgatcattgtacattagctaactgccgtgatgga
ctaatcgatgttgtatatggctcaacatctataacaatctcaaacaactacatgttccat
cataatgaagctatgctcatgggtcatagtgatgatttccttgctgacaagattatgcaa
gtcactattgccttcaactatttcggtgaaggtctgactcaaagaatgcctaggtgcaga
catggatattttcacattgtaaataacatatacactgggtgggagatgtatgcaattggt
ggaagtgccaatccaacaatcaatagccaagggaatgtctttattgcatcagataataaa
ggaacaaaggaggtgactaagcgtgaaatcttaccagaagacgagcagtggaagagttgg
aattggagatcagatggagatataatgctcaatggcgctttctttacaccttctggtgaa
aaaggtcctgaaagctacataaaagcatcaagcatggtagcaagaccagcctcaatttta
ttaagtaactcctctccttctgctggagctctttattgtcagaggggcaaacaatgttag
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