Jatropha curcas (Barbados nut): 105633139 Help Entry 105633139         CDS       T03922                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03440   Homologous recombination jcu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     105633139    03450 Non-homologous end-joining     105633139  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:jcu03032]     105633139    03400 DNA repair and recombination proteins [BR:jcu03400]     105633139 DNA replication proteins [BR:jcu03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     105633139 DNA repair and recombination proteins [BR:jcu03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      105633139     BRCA1-C complex      105633139    NHEJ (non-homologous end-joining)     MRX complex      105633139 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 AAA_21 SbcC_Walker_B Rad50_zn_hook AAA_29 ABC_tran AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  105633139 NCBI-ProteinID:  XP_012071087 LinkDB All DBs Position Unknown AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKNVVTFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDSAYKLRENIVQDEERTESLKV QMQDLENKVQNVDAKIHQIETTLKDLRKLQEQVSTKTAERRTWFEQQQRQYEALEEENED TDEEMIEWKTKFDEKIASLESKVRKLEREMNDMETKSSFLKQSITEYTQENFRLQTEADA HISLKNERDSTIQKLYAKHNLGSLPHAPFSDDVALNLTNRLKSRLIDLEKDLKDKKTSNN NEVKTAEDHYWDANDRWKNIEAQKHAKLEIKNGIMNRITEKELEHASFEEKVVHVNLSHL DEKEKNLKLEVERKTNQLAERDFESNILRKESERYGIEQQIKAVEREREILARDSEDRVK LNLKKEELENIKKKHRKIIDEWKDRIKGVLKGRLPADKDMKKEIIQAQRALGTEYDDLNS KSREAEKEVNVLQMKIQEANNNLSKLRKDMDSRKRFIESKLQFLDQQSVTIDLYLKVLDS AKEKKDVQKSKYNIADGMRQMFDPFERVARAHHMCPCCERPFSVEEEDEFVKKQRVKAAS SAEHMKVLAVESSNADSYFQQLDKLRMVYEEYIKIGKETIPSAEKNLQALTEELDQKSQA LDDVLGVLAQIKAEKDSVEALVQPIETADRLYQEIQTLQVFVDDLEYKLDFRGQGIRSTE EIQSELSSLQDKRDALRTELEKLRDEQRYMENDLSNIQLRWHSLREEKLNVANTLINVKK AEEELERLVEEKKQVELDEKHLAEALGPLSKEREKLQSYLSELKVKLEQEYDEQKKQLDN YQFEVEALLKINSIIKEYRDLKKGEKFKEVQEKLSLSQSQLQICENRSKEILADLNRSKE ILLKQDSIKRNIEDNLNYRKTKAEVDKLTQEIESLEERILNIGGVSTVEAELIRHSQERE RLLSELNKCRGTMSVYQSNISKNKIDLKQSQYKDIDKRYFDQLIQLKTTEMANKDLDRYY NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHSIIEAQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacggttgataagatgctgataaaaggaatccggagtttcgatccggagaacaaa aacgttgttaccttcttcaagcccttaaccctaatcgttggcccaaacggcgctggcaaa accacgattatagagtgtttaaagctttcttgcacgggagaactgccgccaaatgcgagg tctggccatagttttattcacgatccaaaggttgcaggggaaacagagacaaaagggcaa attaagctacggttcaagactgcagctgggaaagatgtcgtatgcataaggtcattccag ctaactcagaaagcatcaaaaatggagtacaaggcaattgaaagtgtgcttcaaactata aatccacatactggagagaaagtttgcctcagctatagatgtgctgacatggaccgagaa atccctgctttaatgggtgtctcaaaggccattctggagaatgttatatttgttcaccaa gatgaagctaactggccgttgcaggatccttccacattaaaaaagaagtttgatgatatc ttctctgccactcgatatacaaaagccttagaggtcattaaaaaacttcacaaggatcaa gctcaagagataaagacatacaaactaaagttggagaatcttcaaaccttaaaggactct gcatataagcttcgggaaaacattgttcaagatgaagagagaactgagtctttaaaagtc caaatgcaagatttagaaaataaagttcagaatgttgatgcaaaaattcatcaaattgaa accactctgaaagatcttagaaagctacaggagcaggtatcaacaaaaaccgctgaaagg agaacttggtttgagcagcagcagaggcaatatgaagctcttgaagaggaaaatgaagac actgatgaagagatgattgaatggaaaacaaagtttgatgaaaagattgcatcattggaa tctaaagttagaaagttggagagggaaatgaatgacatggagacaaaaagttcttttctg aagcagagcattactgagtatacccaagagaatttcaggcttcagacagaagctgacgct cacatttcgctgaagaatgaaagggattctaccatccaaaaactttatgcaaaacataat ttagggtctcttccacatgcccctttcagcgatgatgttgctttgaacctcacaaataga ctaaaatcaaggttaatagatctcgagaaggatttaaaagataaaaagacatcaaacaac aatgaagttaagacggcagaggatcactattgggatgcaaatgaccgttggaaaaacatt gaggcccaaaagcatgctaaactggagataaagaatggcattatgaatcgcattacagag aaggaacttgagcatgcttcatttgaagaaaaagttgttcatgttaacctttctcatctg gatgaaaaagaaaagaacttgaaacttgaagttgagagaaagacaaaccagcttgctgaa agagattttgaatcaaacattcttcgaaaggaaagtgagcgatatggcatagagcaacag attaaggcagttgaacgggagagagaaatcttggctcgagactccgaggacagagtcaaa ctgaacctgaagaaggaagagttggagaatatcaagaagaagcataggaaaataattgat gagtggaaggacagaatcaaaggagtgctaaaggggagacttcctgctgataaggatatg aagaaggaaattattcaagcccaaagggctcttggaacagaatatgatgacttgaattca aaatctagagaagctgagaaggaagtaaatgtgttgcagatgaaaatacaagaagctaat aataacctgtccaaacttcgcaaggatatggattcaaggaagagatttattgaatccaaa ctccagttcttggatcaacaatcagttaccattgatttgtacctcaaagttttggactct gcaaaggagaaaaaagatgtccagaaaagcaagtacaatattgcagatggtatgcggcag atgtttgatccttttgaaagagttgcccgtgctcatcacatgtgcccttgctgtgagcgt cctttctctgttgaagaggaagatgaatttgttaaaaagcaaagagtgaaggctgcaagt tctgctgagcacatgaaagtgttggctgtagagtcctcaaatgcagattcttattttcag cagctggacaagctccgtatggtttatgaggaatacatcaaaattggcaaggaaacaatt ccttctgcagaaaaaaatttgcaagcacttaccgaggagttggaccagaagtctcaagcc cttgacgatgtattgggtgttttagctcaaataaaggctgagaaggactcagttgaggcc ctggtacagcctattgaaactgctgataggctttatcaagaaattcaaaccttgcaagta tttgttgatgatttggagtacaagcttgactttcgagggcaaggcatcagatctacagaa gaaattcagtcagaacttagcagtttgcaggacaaaagggatgctttgcgtactgaactg gaaaagttaagggatgaacaaagatacatggaaaatgatctgtccaacattcaattgcga tggcattctctaagggaggaaaaacttaatgtagctaacaccttgattaatgtcaaaaaa gcagaagaagaattggaacggttggttgaagaaaaaaaacaagttgagcttgatgagaag catttggcagaggctcttggccctttatctaaggagagagaaaaattacagagttacctt agtgaactgaaagtcaaacttgagcaggaatacgatgagcagaaaaaacaattagacaat tatcagttcgaagttgaagcattgcttaaaattaattctataattaaggagtaccgtgac ttaaaaaaaggggagaaatttaaggaggttcaagaaaaactctctctatctcagtctcaa cttcaaatttgtgaaaataggagcaaggagattttggctgatttaaaccgaagtaaagag attttgctgaaacaagattccataaaaaggaatattgaggataacttgaattacaggaag acaaaagctgaagtggataagcttacccaggagattgaatcattggaagagagaatactg aatattggtggggtttctactgttgaagctgaacttattagacactcacaagaaagagag agacttctttcagagttaaacaagtgtcgtggtacaatgtcagtttaccagagcaatatt tcaaagaataagattgatcttaaacagtcccaatacaaggacattgacaagcgatatttt gaccaactaattcagcttaagacaactgaaatggcaaacaaggacctggacagatactac aatgcccttgacaaagcattgatgcgcttccatacaatgaaaatggaagaaataaataaa atcataagggaattgtggcaacaaacatacagaggacaagatatagattacattagcatt cattcagattcggaaggtgctgggactcgttcttacagctataaggttctaatgcagact ggagatgcagagctggaaatgagagggcggtgcagtgctggtcagaaggtcctagcttct ctcatcattcggttagctttagccgagacattctgcctcaactgtggaatactagcccta gatgagcctacaacaaacttggatggcccaaacgcagagtctcttgctgcagctcttctt agaatcatggaggatagaaaaggccaggagaattttcaacttattgtaattactcatgat gaacgctttgctcaactaattggtcaacggcagcacgcagaaagatattatagagtcgca aaagatgatcatcagcatagcataattgaagcccaagaaatttttgattga

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