Jatropha curcas (Barbados nut): 105633574
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Entry
105633574 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105633574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105633574
03029 Mitochondrial biogenesis [BR:
jcu03029
]
105633574
Membrane trafficking [BR:
jcu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
105633574
Mitochondrial biogenesis [BR:
jcu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105633574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_Vps41
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
BCAS3_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
105633574
NCBI-ProteinID:
XP_037492593
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MTSQSSNSSILCASFNQDNSGFAISTKDGFKIFDPNTGRLCYERAVGAFIIVEMLYSSSL
LAIIGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNRKRLLVVLQEKTYIYDL
NSLAXIDTIDTVPNIEGLCAISPSLDGCFLALPASTTKGSVLVYNVMELQSHCEIDAHRA
PLAAIALSSNGMYIATASEQGTIIRVHLVLDATKSYSFRRGTYPSTIFSLSFGPSLQLPX
ILVAASTSGSIHVFXLGFAINLRNRRSSSFLGSILPESVNDVLDPAHHHVLHNAVPTGVK
SYLVVRKVDKVADTSSTKLVAFRATISVITFNGYFQEYIVNINNLNESKWSLEREFSLLA
STTGEEQQFQMV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgactagccagtcctctaactcttccattctctgcgcctctttcaatcaagataatagt
ggctttgcaataagcactaaggatggcttcaaaatattcgatcctaacacaggccgtctc
tgttatgaacgagctgttggagcttttattattgttgaaatgctttacagttctagtctt
cttgctattattggagctggtgaacagccttctttatccccacggcgtctctgtttgttc
aatactactaccggaactgcccttcgagaactgaatttcttaacttcgatccttgctgtt
cgattaaatagaaaaaggcttcttgttgttttgcaagaaaagacatatatttatgactta
aatagtcttgcanatattgacactattgatacagttccaaacatagaaggactttgtgca
atctcccctagtttggacggttgcttcttggctcttcctgcaagtacaactaaaggatca
gttctggtgtacaatgtcatggaactccagtcacattgtgagatagatgctcatcgtgca
ccactggcagcaattgccctttcttccaatgggatgtacattgctacagcatcggaacag
ggaacaataatcagagttcatctagttcttgatgctactaagtcttatagtttccggaga
gggacatacccatcaacaatattttccttgtcgtttggtccttcacttcagcttccataa
attcttgtagcagcaagtacttcaggttctattcatgtcttctaactggggtttgccata
aatctgagaaatagaagatcaagtagtttccttgggtcgatattacctgagtctgtaaat
gatgtactggatccagctcatcatcacgtgcttcacaatgctgttccaactggagtaaag
agttacctggtagtgcgcaaggtggacaaggttgctgacacatcatcaactaaacttgtt
gcttttagagccactatatcagtaataacctttaatggttacttccaggagtatattgta
aacattaacaatctgaatgaatctaaatggagcttggagcgtgaatttagtcttttggca
tcgactactggtgaagaacaacaatttcagatggtgtga
DBGET
integrated database retrieval system
