Jatropha curcas (Barbados nut): 105634038
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Entry
105634038 CDS
T03922
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105634038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105634038
04121 Ubiquitin system [BR:
jcu04121
]
105634038
03036 Chromosome and associated proteins [BR:
jcu03036
]
105634038
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105634038
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105634038
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
105634038
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105634038
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105634038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-C3HC4_2
zf-HC5HC2H
zf-C3HC4
zf-RING_2
BRCT_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_6
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
zf-rbx1
PTCB-BRCT
zf-Nse
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
105634038
NCBI-ProteinID:
XP_012072188
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MGDQSHLEKMGRELKCPICLSLLNSAVSLTCNHVFCNSCILKSMKSGSNCPVCKVPYRRR
EIRASPHMDSLVSIYKNMEAASGFQIFVTQNPSSTKLSDENKRAEDGTNSNRENVHRLYQ
DRLENQKTSKRKGSRKTIKSNLDVSDSIAAKPAFPTKKRVQVPQHLPSETPTRPDKLEMG
TGENIGHGFKNISSITGENPVTKENGEPVLAPFFWLRDEEDIEKLSQHTIGSQLLDITPP
NIPTFSDIKDSDNDNPSQLSPTEEVCGKSNDADLFDSEMFEWTQRACSPELFSSPSMIQD
ENAGDIDGIQENKQEALLLSSNTNEHRIENEKCFDTEHVTAIAGDELPNPSPLRPKSSGI
QIAYNRSKKRGRTAGEATLRKCAKKYAEKDFKVPSDAKTKSRKIMQKEAPDNMGNSSNIT
KTKSKAVFSTAATETKTKNVPLISLRAETLNLGDRKMAAELRISQGKNQIDNGNLGKRKI
CGKVSTKDKTDCALRSKKRKPNSSDIDMVKEICTVQNPVEEDTRPSDIGDRSISGTKPKC
QKHGKEVNSELSSESNQKLRRPKTMKVSLYGISEDGLANDHQERCNGISAKETEHTEKAT
DVPLKQTQISEKVTNVSGKETQSTEKVQGSLSRILDNSVTLGKLRRANGVALRACQTLAQ
KIQCAFCLSSEDTEASGEMVHYYNGRPVVANYNAGSKVIHSHRNCAEWAPNVYFEDDTAI
NLEAELTRSRRMKCCCCGLKGAALGCYEKSCRKSFHVPCAKMMPQCRWDTDNFVMLCPLH
TFSKLPTEESESQERIRKKCIPKRQNPNKCNQVVFKHDASTHPSWNWSATPKKLILCCSA
LTVEERELVSEFQRLSGATVLKNWNLSVTHVIVSTDENGAFRRTLKILMGILEGKWILNI
QWIKACMKAMKPVQEDQYEVMVDTHGIRDGPQLGRLRILNKRPKLFEGFKFYLMGDFVAS
YKGYIQDLLVAGGGSILHRKPISGGDSISSLGSPSPSTFVIYSLELPGKCDLSRKDMILN
RRRSDAEALASATGAKAVSNSWILNSIAACKLQVLLNNGDTFN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcaaagtcaccttgagaaaatgggtagagagcttaagtgccccatctgcttg
agtttactgaattcggctgtttcgcttacatgcaatcatgtattttgcaattcgtgtatt
ctgaagtcgatgaaatcgggttccaattgcccagtttgtaaggtaccatatcggcgcaga
gaaattcgagcttctcctcacatggatagcttggtgagcatttacaaaaatatggaagct
gcttcaggattccagatatttgtcactcaaaatccttcatcaactaaattatctgatgaa
aataagcgagcagaagatggtacaaacagtaatagagaaaatgttcataggctttatcag
gacagactggaaaatcaaaaaacatccaaaagaaaagggtcaagaaaaactattaaatcc
aacttggatgtttctgattccattgctgcaaaacctgccttcccaaccaagaaaagagtc
caagttccacaacatcttccttcagaaactccaacacgacctgacaagctagaaatggga
accggtgaaaacatagggcatggatttaagaacatttcatcaatcacaggggagaatcct
gtcaccaaggaaaatggtgaacctgtgcttgcacctttcttctggttgagagatgaagaa
gatatagagaagttaagtcagcatactattggcagccaacttttggatataacacctcca
aatattcctacttttagtgatatcaaggattcagataatgataacccctctcaattatcc
cccacagaagaagtttgtggcaaatcaaatgatgcagatctttttgatagtgaaatgttt
gaatggacacaaagagcttgctcccctgaacttttttcaagtccttctatgatacaggac
gagaatgcaggtgatattgatggaattcaagaaaacaaacaagaagcactgttgttgagt
tcaaatacaaacgaacataggattgaaaatgaaaaatgtttcgatactgaacatgtaacg
gcaattgcaggtgatgaattgcctaacccatcacctctgagaccaaaaagttcaggtatt
caaattgcatataatagatccaagaaaagaggtaggactgctggggaagcaacgttgagg
aagtgtgctaagaaatatgcggaaaaggattttaaggttccttctgatgcaaagacaaaa
tctagaaaaattatgcaaaaggaagcacctgataacatgggtaactcttcaaacattacg
aaaactaagagtaaggctgtttttagtactgcagcaactgaaacaaaaacaaaaaacgtt
cctcttatttctcttagagcagaaaccttgaatcttggtgacagaaagatggctgctgag
ttgcgtatttcacagggcaagaatcaaattgataatggaaatcttggaaaaagaaaaatc
tgtgggaaggtcagcaccaaggacaagactgattgcgctttgaggtcgaagaaacgaaaa
ccgaattcttctgatatcgacatggttaaagaaatttgtacagttcaaaacccggtggag
gaagatacaagaccctctgatattggtgataggtccatctcaggtaccaagccgaaatgc
cagaaacatggcaaagaagttaactctgaattaagttcagaaagcaatcaaaaattaaga
aggccgaaaactatgaaagtttccctttatggtatctcagaagatggattggctaatgac
catcaagaacgttgtaatggtatatctgcaaaggaaactgaacatactgaaaaagcaaca
gatgtccctctaaaacaaactcaaatcagtgaaaaggtaactaacgtctctggaaaagaa
actcaatccactgaaaaagttcagggcagtctttcaagaatccttgataattcagtaaca
ctagggaagcttaggcgagcaaatggagtggctttacgtgcttgccaaacacttgctcag
aaaattcaatgtgcgttttgtctttcttcagaagacacagaggcctcgggagagatggtc
cactactacaatggcaggcctgtagttgccaactacaatgctggatccaaggtcatacac
tctcatagaaattgtgctgagtgggcgcctaatgtttattttgaggatgatactgctatt
aaccttgaagccgaattaactagaagtaggaggatgaagtgctgctgctgtggactcaaa
ggtgctgctctaggatgttatgaaaagagctgtcgtaaaagttttcatgtcccatgtgca
aagatgatgccccagtgtcgatgggatactgacaactttgtcatgttatgccctcttcat
actttttctaagttgcctaccgaagaatcagaatctcaagagagaattagaaagaaatgc
attccaaaaagacagaatcccaacaagtgcaatcaagttgtttttaaacatgatgcaagt
acacatccaagttggaattggagtgcaactcccaaaaaattgattctttgttgttctgct
ctgacagttgaggaaagggaattggtttctgaatttcaaaggttatctggagctacagtg
ttgaaaaattggaatttgagtgtcacccatgtcattgtatcaacagatgaaaatggagca
ttcagaaggacccttaaaattttaatgggtatcttagagggcaaatggatactgaatatt
cagtggattaaggcttgcatgaaggccatgaaacccgttcaagaggatcaatatgaagtt
atggttgatactcatggaattagggatggtccccaacttggaagactgagaatcctgaac
aagcggccaaaactttttgaggggttcaaattctatttgatgggagattttgtagcttct
tacaagggatatattcaagatcttcttgttgctggtggaggatctattctgcatagaaag
cccatttctggaggtgatagtatctcatcattgggttccccttcaccttcaaccttcgta
atttatagcctggagctacctggtaagtgtgatttaagcaggaaggatatgattttaaat
cgaaggaggtctgatgctgaagctctggcaagtgcaacgggagccaaggcagtgagcaat
tcttggattttgaattccatagcagcttgtaaattgcaagttttgctgaataacggtgat
acgttcaattga
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integrated database retrieval system
