Jatropha curcas (Barbados nut): 105634123
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Entry
105634123 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105634123
Spliceosome [BR:
jcu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105634123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
zf-RING_2
Lactamase_B
zf-RING_11
zf-rbx1
Lactamase_B_2
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
Lactamase_B_3
zf-RING_5
Myc_target_1
FANCL_C
Motif
Other DBs
NCBI-GeneID:
105634123
NCBI-ProteinID:
XP_020534924
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MAIECLILGAGQEVGKSCVVVSINGKRIMFDCGMHMGYDDHRRYPDFSLISKSRDFDGAL
DCVIITHFHLDHIGALPYFTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEEQF
TSDHISACMKKVIAVDLKQSVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNM
TPDRHLGAAQIDRLELDLLITESTYATTIRDSKYARKREFLKVVHKCVAGGGKVLIPTFA
LGRAQELCILLDDYWERLNLKVPIYFSAGLTIQANMYYKMLIGWTSQKVKETYSTHNPFD
FKNVYNFDRSLIDAPGPCVLFATPGMISGGFSLEVFKHWAPSERNLVTLPGYCVAGTIGH
KLMSGKPTKINLDKDTEVDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKSVILVHGEKPKM
ASLKERIESEMGIQCYVPANSDTVCIPSSVFVKAGASEMFIRSCLSPNFKFLNRSSEDTS
DLILHSTNSTSQLQVTDERVTNGILVMEKCKKARVVHQDELLLMLGKKQHDIRFAYCCPV
YVENLDVARRELTTAHEYLTSLRNAVGFSNYSQNXLLIFLEIIKKKKTFIISLSLFCFLS
IFAFSPPMSTQPTVTSAASAESGSRAPLLLPRQEPPSSPTVRPTSLAFLLGRATGRRGPS
MLVRETAARELEERRADWGYSKPVVALDMLWNTAFVVVSITMLILTADEKPNTPVRIWIC
GYALQCLVHVVLVWLEYRRRNSRTGRDEMRRQRQQETEEGNVDSEDEDSSDRGSGSFSSR
SSVTKRCESVNTMASFLWWIVGFYWVVSGGDLLLQNAPRLYWLAVVFLAFDVFFAIFCVV
LACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQMMVNEEKPTVGAGKMVP
IETSSGYLANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPL
CKYNILKGNEQV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgaatgcctcatccttggtgctgggcaggaggtagggaaaagctgcgtggta
gtgtcaatcaacggcaaaaggataatgttcgattgtgggatgcacatgggctatgatgat
caccgtcgttatcccgatttttctcttatctctaagtccagagattttgatggcgcgctt
gattgtgttataattacacactttcatttggaccatatcggtgctcttccttacttcacc
gaagtttgtggttatcatggaccaatttacatgacgtatccaacaaaggcattggctcct
ttgatgttggaggattatcgaaaagtaatggttgatagaaggggggaggaagagcaattt
acttctgatcatatttcagcatgcatgaagaaagtcatagctgtggacctgaagcagagt
gtgcaggttgataaagatcttcagatccgtgcctactatgcaggtcatgttcttggagcg
gcaatgttttatgcaaaggtgggagactctgctatggtgtacacaggagactataatatg
accccagatagacatcttggagcagctcaaattgaccgtctggaactggaccttctcata
acagagtccacatatgcaacgactatacgtgattcaaaatatgctcggaagagggaattt
cttaaagttgttcataaatgtgttgctggtggtggaaaggtgcttatccctacctttgcg
cttggaagagctcaggaactttgtatattgttggatgattactgggagcgcttgaatcta
aaggttcctatatacttctctgcaggtttgacaattcaagccaatatgtactacaaaatg
cttattggctggaccagtcagaaggtcaaagagacgtacagtacacacaatccgtttgat
tttaaaaatgtttataattttgaccgctctctgatagatgctcctggaccttgcgttctc
tttgccacacctggaatgattagtggtggtttttcactggaggtttttaagcattgggct
ccttctgagaggaatctggtgacattgcccggatattgtgtggctggaaccataggacac
aagttgatgtctggtaaacccactaaaattaatttggacaaggacactgaggttgatgtg
cgatgccagattcatcaattgtctttcagccctcatacggatgccaaggggattatggat
cttgttaaatttctctctcctaagagtgtgatactagtacatggtgagaagcctaagatg
gcttctcttaaagaaagaattgagtctgaaatgggaatccaatgttatgttcctgctaat
tctgacactgtgtgcattccttccagtgtctttgttaaagcaggtgcctcagaaatgttt
atccgcagttgcttgagccctaatttcaaatttttaaacagaagttctgaagatacatca
gatttaattttacatagcacaaatagcacatctcagcttcaggtaactgatgaaagggtt
accaatggaatcttggttatggaaaaatgcaagaaggcaagagttgtgcatcaagatgag
ctgctgctcatgttgggaaaaaaacaacatgacattcggtttgcttattgttgtcctgta
tatgttgaaaacttggatgtggccagaagagaacttaccacagcacatgaatacttgacc
tctctgagaaatgctgttggcttcagcaattattcacagaattaactactgattttcctg
gaaataataaaaaaaaaaaaaactttcatcatctctctctctctgttttgttttttatcc
atctttgctttctctcctccaatgtcaacgcaacccaccgtcacgtcagccgcatcggcg
gagagtggctctcgcgcgcctttgcttcttccccgtcaagaacccccttcctcccctact
gttcgcccaacctccctcgcttttcttctcggccgcgccactggtcgacgtggcccttcc
atgttagtaagggagacggctgcacgtgagctggaagaacgacgcgccgattgggggtac
tcgaagcctgtggtggccttggacatgctgtggaacacggcgtttgtagtggtttcgata
actatgctgatactgactgcggacgagaagccgaatactccggtaaggatttggatctgt
ggatatgcgctgcagtgcctggtgcatgtggttttggtgtggttggagtataggagaagg
aatagtcggacagggagagatgaaatgaggcggcagcggcagcaagaaactgaagaagga
aatgttgatagtgaagatgaggatagtagtgataggggttcgggttccttttctagccgg
tcaagtgtcactaaacgatgtgaatcagtgaacacgatggcatcatttctatggtggata
gttggcttttattgggtagtttctggcggggacttacttttgcaaaatgctccccgctta
tactggctggctgtggtttttctggcatttgatgtgttctttgcgatcttttgtgttgtt
ttggcatgtttgattgggatcgctctctgttgctgcttaccatgcatcatagctatactt
tatgctgttgcaggacaggaaggtgcatctgaagcagatcttagcatcctcccaaaatac
agatttcagatgatggtcaatgaggaaaagcccactgttggggcagggaaaatggtcccc
attgaaactagcagtggatacttggcaaatgaacgtattctcttacctgaggatgctgaa
tgctgtatatgtctctgcccgtatgaggatggagcagagctccatacactcccttgcaac
catcatttccactcaacatgtatcgtgaaatggctgaagatgaatgctacatgccccctc
tgcaaatacaacattctgaaaggaaatgagcaagtctga
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