Jatropha curcas (Barbados nut): 105634134
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Entry
105634134 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105634134
Enzymes [BR:
jcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
105634134
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
105634134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
RRM_1
Motif
Other DBs
NCBI-GeneID:
105634134
NCBI-ProteinID:
XP_037497218
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MVDPALFCHSSYRVIFGSLWGIALMGKTIHVYGFPSHVTVDEVKNFLESHSGEGTVFAMK
IRETKNGGPRKYAIVQFQTARDAELIISLKWGSQEKICYCEATSYTSYLKARTLDNDIVP
KPRTFLHSMDHITLHFGCHISKEKFSVLWTGTNVLVNFGFGMRKLHFFLSHGQMDYKLDL
SYENVWQIELHCPRGRSVKYLLIQLYGAPRIFEKEIASFNVFESPLFNYLFNYFKDTPDE
QWVRTIDFTPFCLIGHSSGLCLEFPSSINVPKFQENFSYYKESEAIFVLENGNAFSCNLD
LVPIVGPPSGVDLPFEILFRVNLLVQHGCLPGSALDSSFYKLVDPSRMNIDCIEHALEKL
FHLKECCYEPSMWLNEQYRKYLTSKYLPRSPSISLDTGLVYVRRVQITPCKVYFCGPEVN
VSNRVIRHYSKDINNFLRVSFVDEELEKIYSTDLCPRASSGNGDRRTAIYKRILSTLQNG
IVIGNKRFEFLAFSSSQLRENSCWMFASRDGLTAADIREWMGNFRQIRNVAKYAARLGQS
FGSSTETLSVVRKIEIENSSKILEXRGQNQIFWFSLDGIGKISAEFARSGRXNAGAPRFL
SIXHFQIRYGGYKGVGEPVDPPLPLKNYTLRKSMCKYESENTKLDVWGYSKVSSLVFLNR
QLITLPFRPLVLGGTIIFWRERNREESPVDQPRCAFKQTPLKAQKPLRDFECLQERRNLN
HSQTEMLLCGYQPGCPEPFXSMMLQMFRASKLLDLRTKSRIFVPNGRSMMGCLDETRNLE
YGQVFVQYSGSKHKQVYDSSTMVGGIGSGNGFVIEGMVIVAKNPCLHPGDIRVLRAVNVP
DLHHMVDCVVFPQKGPRPHPNECSGSDXMEISTLDGDIYFVCWDPDLIPRLQIPPMDYTP
EPSLQLDHDVTIQEVEEYFTNYILNDSLGIISNGKIIFXCFQQPKHVWNLQVNFQLAVDF
PKTGVPSXNFLLISHLRVKEYPDFMEKPDKPTYESQNVIGKLFRAVRDIAPHTSSIKSFT
LEVARQCYDPDMEVDGFEDYIDDAFYYKTNYDYKLGNHMDYYGIRTEAEILGGSIMKMSK
AFTKKRDAEAIGLAVRSLRKEARSWFNEKGSGLDSEEDDVYAKASAWYYVTYHPSYWGCY
NEGMNRDHFLSFPWCVYDKLIQIKRKRRCQNLSLLERQFGLGLHFH
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcctgcattattttgccacagtagttacagagtcatatttggaagcttgtgg
ggaattgctttgatgggtaagacgattcatgtgtatggattcccttcccatgtgactgta
gatgaagtcaagaattttctggaatcacattcaggggaaggaactgtttttgcaatgaag
atcagggaaaccaaaaatgggggtccaagaaaatatgctattgttcaattccagactgcc
agagatgctgaattaattatatctttgaaatgggggtcccaagaaaaaatatgctattgc
gaggcaacttcatacacttcatatctcaaggctcggactttggataatgatattgtacca
aagcccagaacgtttttacacagcatggaccatataacactgcattttggatgtcacata
tcaaaagaaaagttttctgttctatggacagggacaaatgttttggtgaattttggattt
ggaatgagaaaattgcacttttttctatctcatggacaaatggactacaagcttgacctt
tcttatgagaatgtttggcagatcgagctacattgtccacgaggccgatctgtgaaatat
cttctaattcagttatatggtgcaccccgaatttttgagaaagagattgcatcatttaat
gtgtttgagagtccgcttttcaactaccttttcaactactttaaggatacccctgatgaa
caatgggtcaggacaattgatttcacaccattctgccttattgggcattcatccggatta
tgtttggagtttccttccagcattaatgttccaaaatttcaggagaacttttcttactat
aaagaaagtgaagcaatttttgttttggagaatggtaatgctttttcttgcaatctggat
ctagttcctattgttggtcctccctcaggtgttgatttgccatttgagatattatttcga
gttaatttgttggttcagcatgggtgccttccagggtcagcacttgattctagtttttac
aagttggttgatccaagtagaatgaatattgactgcatagagcatgctcttgagaagctt
tttcacttgaaagaatgttgttatgaaccttctatgtggcttaatgagcagtacagaaag
tatcttacgtctaagtaccttccaagatcaccttcgatatccctagacactggtttggta
tacgtgcgtagggtccaaattacaccatgcaaagtctatttttgtggtccagaggttaat
gtctcaaaccgtgtgatacgccactattcaaaagatattaataattttctccgtgtgtct
tttgttgatgaggagttagagaaaatttattcaacagatttatgtccccgtgcttcttct
gggaatggggataggaggactgctatttacaaaaggattctctctactctccaaaatgga
atagttattggaaataaaaggtttgagttccttgccttttcatctagccagctgagggaa
aattcttgctggatgtttgcttcaagagacgggctcactgctgcagatataagagaatgg
atgggaaactttcgtcagatacgaaacgtggctaaatatgcagccagattaggtcagtct
tttggttcatccactgaaacactgagtgttgtaagaaaaattgaaattgaaaattcttcc
aagattttagagtgaagggggcagaaccaaatattttggttttctcttgatggaataggc
aaaatatctgctgagttcgctcggagtgggcgttgaaatgctggggcaccaaggtttcta
tccatctagcattttcaaattcgttatggtgggtataaaggtgttggtgagcctgttgat
cccccacttcctctaaaaaattatacattgagaaaaagcatgtgcaagtatgagtctgaa
aatacaaaactggatgtttggggttatagcaaagtatcaagccttgtttttctgaatcgc
caattgattactcttcctttccgacccttggtgttgggcgggaccataatcttttggaga
gaaagaaacagagaagaaagccctgttgatcaacctagatgcgcttttaaacaaactccg
ttaaaggcccagaagccactaagggattttgaatgtctccaggagagacgcaacctaaac
cattctcaaacggaaatgcttttgtgtggttatcagcctggatgccctgaaccattcntt
tcaatgatgctccaaatgttccgagcatcaaagttgcttgatctgcggacaaaatctaga
atctttgttccaaatggaagatctatgatgggatgtttggatgagacaagaaacttggaa
tatggccaggtatttgtgcaatattctggtagtaaacataagcaggtgtatgatagttcc
accatggttggaggcattggatcaggcaacggttttgtgattgagggaatggtcattgta
gctaaaaacccatgtctgcacccaggtgatattcgtgttttaagggctgtgaatgtaccg
gatttgcaccatatggtggactgtgttgtttttccacagaaaggaccaagacctcatcca
aatgaatgctcgggtagtgattagatggagatatctactttagatggagatatctacttt
gtctgctgggaccctgatttaatcccacgtctgcaaatcccaccaatggactatacacca
gagccaagtttgcaactcgatcatgatgtcacaattcaggaagttgaggagtatttcacc
aattacatcttaaatgacagcttgggaatcatttctaatgggaaaatcattttctaatgc
tttcaacaacctaaacatgtctggaacttgcaagtaaattttcaattggcagttgatttt
ccaaaaactggagtaccgagctgaaatttccttctcatctctcatctacgtgtcaaagaa
tatcctgatttcatggaaaagcctgacaaacccacctatgaatctcagaatgtgattgga
aagcttttccgagcagtgagggacatcgcaccacatacaagctctattaagtcctttact
ttggaagtggcaaggcagtgttatgaccctgatatggaagttgatggttttgaggattat
atagatgatgccttctattacaaaacgaattatgattacaaattgggtaatcatatggac
tattatggcatcagaactgaggctgaaattctcggtggaagtattatgaaaatgtcaaaa
gctttcaccaagaaaagggacgcagaagcaattggtttggcggtgaggtccttaagaaaa
gaagcaagatcctggtttaatgaaaagggaagtggattagattctgaagaagatgatgtt
tatgcaaaagcctccgcttggtactatgttacttatcatcctagttattggggttgctac
aacgagggaatgaatcgagatcattttcttagctttccttggtgtgtttatgacaagctg
atccagatcaagaggaagagaaggtgtcaaaatttatcattgcttgaacgccagtttggg
cttggactgcattttcattaa
DBGET
integrated database retrieval system
