Jatropha curcas (Barbados nut): 105634162
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Entry
105634162 CDS
T03922
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105634162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105634162
03036 Chromosome and associated proteins [BR:
jcu03036
]
105634162
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105634162
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
105634162
COMPASS/SET1 complex (yeast)
105634162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
105634162
NCBI-ProteinID:
XP_012072367
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MATMSLTELDNDTVRSMSVGAVFSDFGGKINSVDFHRKDDLLVTASDDDSVRLYDIASAK
LLKTTYHKKHGADRICFTHHPSSVICSSKYNLDSTGESLRYLSMYDNRCLRYFKGHKERV
VSLCMSPINDSFMSGSLDHSVRIWDLRVNSCQGILRLRGRPTVAYDQQGLVFAVAMEGGA
IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCG
FSLEPSPNTTIEATFSPDGQYVVSGSGDGTLHAWNINVRNEVACWNSHIGIPSCLKWAPR
RAMFVAASSVLTFWIPNNSKSAAEPRPMDTEGVPQPDHSSQS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgtcgctcactgagctcgataatgatactgtgcgaagcatgtccgttggg
gctgttttctcagattttggcgggaagataaattcggttgatttccatcgaaaagacgat
ttgttggtaacagcaagtgatgacgattctgttcggctttatgatattgcaagtgctaag
ttgctcaagacaacttatcacaagaaacatggtgccgatcgtatatgctttactcatcac
cctagctctgttatttgttcctcaaagtacaatttggattctaccggagaatctttaagg
tatctatcaatgtatgataataggtgtcttcgttacttcaaagggcataaagaaagagtt
gtttctctttgcatgtctccaatcaatgatagcttcatgtctggttctctcgaccacagt
gtcagaatatgggatcttcgtgtaaattcttgtcagggaattttgcgtctacgtggtaga
cctacagttgcatatgatcagcaaggtcttgtctttgctgtggcaatggaagggggtgct
attaaattgtttgattcgcgttcatatgacaagggtccctttgatacctttttagttggt
ggagacacagctgaggtttgtgatattaaattcagcaatgatggcaaatcaatgctcttg
acaacaacaagtaacaatatatatgttcttgatgcatatggaggagagaagcgatgtggc
ttcagtttggaaccatcaccaaatacgactatagaggcaactttttccccagatggccag
tatgtggtatcaggctcaggagatggaaccttgcacgcctggaatatcaatgtgcgaaat
gaggtggcgtgctggaatagccacataggcatcccatcgtgcttgaaatgggctccacgt
agagccatgtttgttgctgcatcctctgtgcttacgttttggatacctaataattccaag
tcagctgcggagcctcgacctatggacactgaaggcgtacctcaacctgaccatagttct
caatcatga
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