Jatropha curcas (Barbados nut): 105634235
Help
Entry
105634235 CDS
T03922
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105634235
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105634235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
105634235
NCBI-ProteinID:
XP_012072459
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MLGSNLENTFLITILIVLSLLSPRFEPCHARLQGKYWRPGKVVPTTSVVLQKEKGFGGFS
HGHGRSLLSSATFNVFDYGAKGDGHSDDTKAFEAAWAAACKVEASTIIVPSGSIFLVHPI
SFSGPNCAEKIVFQLDGKIIAPTSAGAWGSGLLQWIEFTKLKGITIKGKGIIDGQGSVWW
NDLPDDSLDSEVTSEHSAKMPGTKPTVLRFYGSTGVTVTGITIQNSPQTHLKFDDCTTVQ
VSDFTTASPEDSPNTDGIHLQNSRDVLIYSSHLACGDDCVSIQTGCSNVYIHNINCGPGH
GISIGGLGKANTKACVSNVTVRDVSIQNTLTGVRIKTWQGGSGSVQGVTFSNIQVSGVQI
PIMIDQFYCDGSKCRNESSAVAVSSINYVNIKGTYTRNPVHFACSDNLPCTGVSLDTIEL
KSVGEDSQPFCWNTYGELESEIVPPINCLQTGKSKKQIVSC
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctcggttccaatcttgaaaatacttttctaatcactatcctcattgtcttgtctctt
ttatctccaagatttgaaccttgccatgcaagactacaggggaagtattggagaccaggc
aaagttgtcccaacaacttctgtggttttgcagaaggaaaaaggttttggtggttttagc
cacggccatggcaggagcttgttaagctctgccaccttcaatgtatttgactatggtgct
aaaggtgatggtcatagtgacgacacaaaggcatttgaggcagcatgggcagctgcttgc
aaagtagaggcgtcaacgataatagttccttctgggtctattttccttgtacacccaatt
tctttctcaggtcctaattgtgcagaaaaaattgtatttcagttggacggcaagatcata
gctcctactagtgctggagcatggggatcagggcttctacaatggatcgagttcacaaaa
ctaaaagggattacaatcaaaggtaaaggcatcattgatggacaaggttcggtctggtgg
aatgacctaccagatgatagtctagactcagaggtaaccagtgagcacagtgcaaaaatg
cctggcaccaagccaacagtactaagattctatggaagtactggagtaactgtcacaggc
ataacaattcaaaacagccctcaaactcacctgaaatttgacgattgcacaactgttcag
gtttctgattttaccactgcatctcctgaggacagcccaaacaccgatggaattcacctt
cagaactcccgagatgtgctcatttacagcagccatcttgcctgtggggatgactgtgtg
tctattcaaactggatgctcaaatgtgtacatacacaatataaactgtggaccgggacat
ggaattagcattggagggttgggcaaagccaacactaaagcgtgtgtttcaaacgtcact
gttcgtgatgtttcgatacagaacacattaactggtgtcaggatcaagacatggcaggga
ggatcaggttcagtacaaggagtcacattctcaaacattcaagtttccggagtgcaaatt
ccgataatgatcgaccaattttactgtgatggcagcaaatgccgaaatgaatcttctgct
gtggctgtgtcaagcataaactatgtgaacataaaaggcacatatacaagaaatcctgta
cactttgcatgcagtgacaacttgccatgcactggtgtatcattagataccatagagctt
aaatcggttggagaagacagccaacctttctgttggaacacatatggagaactggaaagt
gaaattgtccctccaattaactgcttgcagacaggcaaatcaaagaagcaaatagttagc
tgctaa
DBGET
integrated database retrieval system