Jatropha curcas (Barbados nut): 105634332
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Entry
105634332 CDS
T03922
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105634332
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
105634332
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
105634332
NCBI-ProteinID:
XP_037491815
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
LIDNGIVQVTLSKPGGFVTGIKYNGVENILETKRKENDRGYWDIVWYKPGAEDIFDQLQG
ENFSVITQNEDQVEVSFNRKWDISIKNSIVPLNIDKRYILRRGSSGFYTYTIMERLEGWP
TVSMDQIRIVFKLQNEMFNYMVVSDNIQKIMPTYQDRENGQALAYPEAVLLTKTSNPELR
GEVDDKYEYSMDRKDSKVYGWISKDPAMGFWVIRPSDEFCTGGPFRQELTAHTGPFLLSM
FTSSHYLGENTKYEEPWNMVFGPVFIYLNSNSTADDQALWNDAKRQMSVEVESWPYNFTQ
SEDFPYSDKRGTVSGQITMQNEGDSKLASFAYVGLAAPGDVDSWQFETKGYQFWTQANNE
GSFTIENIRVGTYNLYAWVPGFVGNYKYGENITITPGSNIKLGVLNYESPRNGPTIWEIG
YPDRSAAEFFVPDPEPTLTNKLFINQPNEKFRQYGLWDRYTDLYPTEDLIYNVGTSNCSR
DWFFIHVPRNTGKSAYEPTTWQITFELKTVIRTGNYTLQLALASATEAEIQVRFNDPSAK
RPHFTTGRIGKDNAIARHGIHGIYRFYTVDVPNDVLVDGKNTIYLTQTRITAIFQGVMYD
YIRLEGPTSS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgataatggaattgttcaagtcactctatccaagccaggtggttttgtcactgga
ataaaatataatggagttgaaaatatactagaaactaaaaggaaggaaaatgatcgtggc
tattgggacattgtttggtacaaaccaggggctgaggacatttttgaccagttacaagga
gaaaattttagtgttataacacaaaatgaagaccaagtggaagtttctttcaacagaaaa
tgggacatttccatcaaaaatagcatagttcccctaaacatcgacaaaaggtatatattg
cggcgtgggagctcaggattttacacatatactataatggaacgtttagaagggtggcct
accgtcagcatggatcaaattaggattgttttcaaactacaaaatgaaatgttcaactat
atggtggtatcagacaacatacaaaagatcatgcctacataccaagatcgggaaaatggt
caagctctagcatatcctgaagctgttctcttgaccaaaacaagcaatcctgaattgcgt
ggagaggtggatgacaagtatgaatattccatggatcgcaaagatagcaaagtgtatggc
tggatatcaaaagatccggcaatgggattttgggtgatccgacccagtgatgagttctgt
acaggtggaccttttagacaagaactaacggctcatactggtccatttcttttatctatg
tttactagttctcattatttgggggaaaatacaaaatatgaagagccatggaatatggtt
tttggacctgtttttatttatcttaattccaactcaactgctgatgaccaagcactttgg
aatgatgctaaaagacagatgtcagtggaagttgaaagttggccatacaattttactcaa
tcagaagattttccttattctgataaacgaggaactgtctcagggcaaataacaatgcaa
aatgaaggggattccaaattggcaagttttgcttatgtgggcttggcagctccaggagat
gtagattcatggcaatttgagaccaagggttatcaattctggactcaagcaaataatgag
gggtctttcacgattgaaaatatccgagttggaacttacaatttgtatgcatgggttcct
ggatttgttggaaattacaagtatggtgagaacatcaccattacaccaggaagcaatatt
aaattaggcgtccttaactatgaatctcctagaaatgggccaaccatatgggaaataggg
tatcccgatcgatctgctgctgaattctttgtgccggacccagagccaacacttacaaac
aaattattcatcaaccaaccaaatgaaaagtttaggcaatatggattatgggatagatac
actgacttatatcctacagaagatctcatatacaatgttggcactagtaactgcagtcga
gattggttttttattcatgttccgagaaatactggaaaaagtgcgtacgaaccaaccaca
tggcaaataactttcgagctcaaaactgtgattcgaactggaaattacacattgcaatta
gctttagcatctgcaaccgaagctgagatacaggtgaggttcaacgatccaagtgcgaag
cgacctcatttcacaacagggcgaataggcaaggacaatgcaattgcaaggcatggaatt
cacgggatctacaggttttataccgttgatgtgcctaatgatgtacttgtcgatggaaaa
aatacaatttatttgactcagacaagaattaccgcaatttttcaaggcgtaatgtatgat
tacattcgtttagaagggcctactagtagctga
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